Caldicellulosiruptor diazotrophicus: CaldiYA01_13640
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Entry
CaldiYA01_13640 CDS
T08057
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cdia
Caldicellulosiruptor diazotrophicus
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_13640 (sbcD)
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CaldiYA01_13640 (sbcD)
Archaeal homologous recombinant proteins
CaldiYA01_13640 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BCS81404
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All DBs
Position
complement(1412348..1413619)
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AA seq
423 aa
AA seq
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MAIRGVHTADLHFGVTTYSRETPDGLGSRVHDFFKTFDRILQFVRENSIDLLLITGDIFK
DREPNSTLRNMFYKRIVDISKEGVLVIIIPGNHDMHPFETKDHSIKVFEIFDQPNIVVMD
KPFEVKEFEIKDEKLRIVAVPYLYLERFVDETFPQNTEELDLVTANFFNRKLGHILDSLE
DNIPTILAGHFTVIEAQIGSERSIMLGKDIKVPLSCLLNPKLKFVALGHIHKPQILYAAN
PTVLYCGSPDRIDFSEANDSKGFVVFEIDKDSFRFEFQPVKVRPFCQLEVDVFENEIENL
TKKLLDTIEEKIKMFEQNTLSSIQVSVVKLIIKTQSLIKEKIDIGLIERFLRDRCFVLAP
IEVEVVDSKKDFRIAEVDEKSDPVYAFEKFLSANKKYTGIENKDKVISEFKKLLYEVQEN
ESK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcaattagaggagttcatacagctgacctacattttggagtgacaacttatagccgt
gaaactccagacggacttggttcacgagtacatgattttttcaaaacatttgacagaata
ctgcagtttgtgcgggaaaatagcattgatcttttacttataactggtgatatttttaaa
gacagagaaccaaactctacactgaggaatatgttttacaagaggattgtggatatctca
aaagaaggtgttttggtcataataattccagggaatcatgatatgcatccatttgagaca
aaagaccattctataaaggtctttgaaatattcgaccaaccaaacattgttgtaatggac
aaaccttttgaagtcaaagaatttgaaataaaagatgaaaagctccgtattgtggctgtg
ccatacctttatctggaaaggtttgtggatgagacatttcctcaaaacacagaagagctt
gatttggtaacagcgaacttttttaatagaaaacttggccatattttagactctttagaa
gacaatattccaacaatccttgcagggcattttactgtaatagaggcacagattggcagt
gagaggtcaattatgcttggcaaagatataaaagtgcctctttcttgccttttaaaccca
aagttaaagtttgttgcgctgggtcacattcacaaacctcaaattttgtatgcggcaaac
cctactgtgttgtattgtggttctcctgatagaatagatttttctgaagcaaacgacagc
aagggatttgttgtgtttgaaatagataaagatagcttcaggtttgagtttcaacctgtt
aaggtaagacctttttgccagttagaagttgatgtgtttgaaaacgagatagaaaatctt
actaaaaagctacttgacacaatagaagagaaaataaaaatgtttgagcaaaatacttta
agtagtatacaggtttcagttgtaaaacttataataaaaactcagagtttgataaaagaa
aaaattgacattgggcttattgaaaggtttttgagagacagatgttttgttttagcgcct
attgaagttgaagtagttgattcaaagaaagattttagaattgctgaggttgacgagaag
tcagatcctgtttatgcctttgaaaaatttttatcagcaaataaaaaatacactggtata
gaaaataaagataaagttatatcagaattcaaaaagcttttgtatgaagtgcaggaaaat
gaaagtaaataa
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