Caldicellulosiruptor diazotrophicus: CaldiYA01_14450
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Entry
CaldiYA01_14450 CDS
T08057
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CaldiYA01_14450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_14450
Enzymes [BR:
cdia01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CaldiYA01_14450
DNA repair and recombination proteins [BR:
cdia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CaldiYA01_14450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_2
HHH_5
DUF7435
Motif
Other DBs
NCBI-ProteinID:
BCS81485
LinkDB
All DBs
Position
complement(1495032..1495925)
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AA seq
297 aa
AA seq
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MFYHINSWKGMNFLNIKEYTGFLRVSGVEINFDATFFSGQCFRWKKAEYGYIGVVNRKIV
LVYPQDNNTFDIYNCSPDEFKRFFYWYFDLDKDYNLILKELSYHDKILKKAVEKYRGMRL
LNQEPFECMISFIISQNNNIKRIQMLVERLCQAYGEKVEYRGFFSWAFPEIEDLKKISSE
DLKRLGLGYRAEYIKDAIAKLDEGKIDFEGLKSLNSDEARKILKTVKGIGDKVADCILLY
SLQKYDVFPVDVWVKRALREYYGIENTKQLRQFIKSFGELAGYAQLFLFNYIRNRNE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
ttgttttaccatataaatagttggaaaggaatgaattttttgaatataaaagagtatact
ggttttcttcgcgtaagtggagtagagattaattttgacgccacattttttagcgggcag
tgttttagatggaaaaaggcagaatatggatacataggagttgtaaatagaaaaatagtt
ttagtatatccccaggataacaatactttcgacatatacaactgttcacctgatgagttc
aaaagatttttttactggtattttgacttggataaagactataatttgattttaaaagaa
ctttcttatcatgataagattttgaaaaaagcagttgagaagtacagaggtatgagactt
ttaaatcaagaaccttttgaatgtatgatttcttttataatatctcagaataacaacata
aaaagaattcaaatgttggtggaaagactttgccaggcttatggggaaaaagtagaatac
agaggttttttttcttgggcatttccagaaattgaggacttaaaaaagatttcatcagaa
gatttaaaacgcttagggttaggttatagagcagagtatatcaaagatgcaattgctaaa
ttagatgagggtaaaatagactttgaaggtcttaagtctttgaatagtgatgaagcaagg
aagattttaaaaacggtaaaagggataggagataaggttgctgactgcatattgctttat
tcattgcaaaagtatgatgtgttccctgtagatgtgtgggtgaagcgtgccttgagagaa
tattatggaatagaaaataccaaacagctgagacaatttataaagtcgtttggagaactt
gctgggtatgcgcagctttttttatttaactacattagaaaccgcaatgaataa
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