Caldicellulosiruptor diazotrophicus: CaldiYA01_14560
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Entry
CaldiYA01_14560 CDS
T08057
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdia03016
]
CaldiYA01_14560 (truB)
Enzymes [BR:
cdia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CaldiYA01_14560 (truB)
Transfer RNA biogenesis [BR:
cdia03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CaldiYA01_14560 (truB)
Prokaryotic type
CaldiYA01_14560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SoFic-like_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BCS81496
LinkDB
All DBs
Position
complement(1507466..1508338)
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AA seq
290 aa
AA seq
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MNGVLLVDKPVGITSHDVVEFVRKVFNVKAGHAGTLDPFATGLLVILLGEATKLSSFFTS
QEKTYIATMQFGIKTDTLDITGKIEEKNNLIVEEKEIEECFKNLKGEIELDVPIFSAKKL
RGKKLYEYARKGINIEIPKVKSIIYSIEIINFSYPYLEFKVHCSHGTYIRSLAEKIAQNL
STVGLLSELKRIRSGFFDLKDAVTLSDIRSESIIPVCKLFKNEIKVGRKTYKKILNGNPL
VNQDIEDIIDIDTVFADFYKIWVDKVVFIYKREKDVFKYILKVETADECL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttttgcttgttgacaaaccagtaggaattacctcacatgatgttgttgaa
tttgtcagaaaagtgttcaacgtgaaagctgggcatgcaggaacgctcgacccgtttgca
acagggcttttggtcattttgctgggggaggctacaaagctttcttctttcttcacaagt
caggaaaaaacatatattgcaacaatgcaatttggtataaaaactgatacgcttgatata
actggtaaaatcgaagaaaaaaataatttgattgttgaagaaaaagaaatagaagaatgt
tttaaaaatttaaaaggagaaattgagcttgatgttccaattttttctgcaaagaagctg
aggggtaaaaaactctatgaatatgcgcgaaaaggaataaatattgaaattccgaaggtg
aagagtattatatatagtatagagataattaacttttcctatccgtatcttgaatttaaa
gttcattgtagtcatggaacatatataagaagtttagctgaaaaaattgcacaaaatctt
tctactgtaggtctgctttctgagctaaaaaggataagaagcggtttttttgatttgaaa
gatgcagttactttgagcgatatcaggtcagaaagtataattcctgtatgtaagttgttt
aaaaatgagataaaagtaggcagaaaaacatataagaagattttaaatgggaatccactt
gtaaaccaggatatagaagatattatagatattgacactgtatttgcagacttttataaa
atttgggttgataaggttgtctttatatacaaaagagaaaaggatgtattcaaatatatt
ttaaaggtggaaactgcagatgaatgtttatga
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