Caldicellulosiruptor diazotrophicus: CaldiYA01_14740
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Entry
CaldiYA01_14740 CDS
T08057
Name
(GenBank) hypothetical protein
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CaldiYA01_14740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdia03021
]
CaldiYA01_14740
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_14740
Enzymes [BR:
cdia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CaldiYA01_14740
Transcription machinery [BR:
cdia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CaldiYA01_14740
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CaldiYA01_14740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
NIF
DUF4162
Motif
Other DBs
NCBI-ProteinID:
BCS81514
LinkDB
All DBs
Position
complement(1526450..1526683)
Genome browser
AA seq
77 aa
AA seq
DB search
MLLRPGLDELLKYVDNKYTLSVLVAKRARQLLQQAQKKVDITNFNFDKYVSMAVNEVASG
KISYKYVKPVKKNEIKK
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgcgaccagggcttgacgagcttttaaagtatgtggacaataaatatacgctt
tctgtgcttgttgcaaaaagagcaagacaacttcttcagcaggcccaaaaaaaggttgac
attaccaattttaactttgacaagtatgtttcaatggcagtaaatgaggttgcttctggg
aagatttcttacaagtacgtaaagccggtgaaaaagaatgagattaaaaaataa
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