Caldicellulosiruptor diazotrophicus: CaldiYA01_16010
Help
Entry
CaldiYA01_16010 CDS
T08057
Symbol
serS1
Name
(GenBank) serine--tRNA ligase 1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CaldiYA01_16010 (serS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cdia01007
]
CaldiYA01_16010 (serS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdia03016
]
CaldiYA01_16010 (serS1)
Enzymes [BR:
cdia01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CaldiYA01_16010 (serS1)
Amino acid related enzymes [BR:
cdia01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CaldiYA01_16010 (serS1)
Transfer RNA biogenesis [BR:
cdia03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CaldiYA01_16010 (serS1)
Prokaryotic type
CaldiYA01_16010 (serS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NPV_P10
DUF7307
TMF_TATA_bd
BLOC1_2
CENPH
FapA
DUF7365
Retrotran_gag_2
CCDC113_CCDC96_CC
CCDC22_CC
ATG16
Cauli_AT
Baculo_PEP_C
ERM_helical
Uds1
DUF1664
DUF4200
TMPIT
Prominin
PCRF
SOGA
Mod_r
PhageMin_Tail
AAA_13
Sec10_N
GAS
Motif
Other DBs
NCBI-ProteinID:
BCS81641
LinkDB
All DBs
Position
complement(1644557..1645819)
Genome browser
AA seq
420 aa
AA seq
DB search
MLDLKYIRSNPEKVQEGLSKRNKDISIAPILELDERRRKLLAEVESLKALQNQKSKEVPK
LKKEGKDVTDLMNELKELSDKIKELDSKVKEVEDEIEKILLTIPNIPHESVPVGKDDTEN
VEVRRWGEVREPDFEIKPHWEIGVNLGILDFERASKVSGSRFTFYRGLGARLERALINFM
LDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYHRE
EILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEKL
TADAEDVLKELGLPYRVVLLCSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQAR
RANIRFRRKDGKLDYVHTLNGSGLAVGRTLAAILENFQQKDGTVVVPEVLRRYMGTDVIK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatttaaaatatataaggtcaaatccagaaaaggtacaagaaggactttctaag
aggaacaaagacatttcaattgcgcccattttagagcttgatgaaagaagaagaaagctt
ttggctgaggttgaaagcctgaaagctctgcagaatcaaaaatctaaagaggttccaaag
ctcaaaaaggaagggaaagatgttacagaccttatgaatgagctaaaagagctatctgat
aaaattaaagagttagatagcaaggtcaaagaggttgaagatgagatagaaaagattttg
cttacaatcccaaacattcctcatgagtctgtaccggttggcaaagatgatacagaaaat
gttgaagtaaggcgctggggtgaggtaagagaacctgacttcgaaataaagccacattgg
gaaattggtgtaaatcttggaatcttggattttgaaagagcctcaaaagtgtcaggaagc
cgttttacattttacagaggacttggtgcaaggttagaaagagctttaatcaacttcatg
cttgaccttcacattgaaaagcatggctatactgagctattcccaccttttctggttgcc
agaaaatctatgattggcacagggcagcttccaaaatttgaagaggatgcatttaagaca
acagatgattactttttgataccaacagcagaggtgcctgttacaaactaccacagagaa
gagatactcaaagaagaagatttgccaataaaatatgttgcctactcagcatgttttagg
gcagaagctggtgctgctggcaaagacacaagagggcttattcgtcagcatcagtttaac
aaggttgagcttgtgaagtttgcaaagccagaagattcttatgatgaacttgaaaaactc
acagctgatgcagaggatgttttaaaggaattaggacttccttacagggttgttcttctt
tgttcgggtgatttaggattttcttctgcaaagacatacgacattgaagtctggatgcca
agctatggaagatatgttgagatttcttcttgttcaaactttgaaagctatcaggcacga
agagcaaacatcagattcagaaggaaagacggaaaacttgactatgttcatacgctaaac
ggctcaggccttgctgtgggaagaaccttagcagcaatacttgaaaacttccagcagaaa
gatggaacagtagttgttccagaggttttgagaaggtatatgggtacagatgtaataaag
taa
DBGET
integrated database retrieval system
