Caldicellulosiruptor diazotrophicus: CaldiYA01_16950
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Entry
CaldiYA01_16950 CDS
T08057
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia00470
D-Amino acid metabolism
cdia00550
Peptidoglycan biosynthesis
cdia01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CaldiYA01_16950 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CaldiYA01_16950 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdia01011
]
CaldiYA01_16950 (murD)
Enzymes [BR:
cdia01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CaldiYA01_16950 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cdia01011
]
Precursor biosynthesis
Amino acid ligase
CaldiYA01_16950 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
AdoHcyase_NAD
AlaDh_PNT_C
Pyr_redox_2
NAD_binding_7
TrkA_N
Pyr_redox
KARI_N
FAD_binding_3
WIYLD
SOXp
Motif
Other DBs
NCBI-ProteinID:
BCS81735
LinkDB
All DBs
Position
complement(1744825..1746201)
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AA seq
458 aa
AA seq
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MDLIGKNVLIVGLGKSGLACAQFLKKYGAFVIGFDEKAEEQFKEEDRNCAEKYCDEIYYC
EIPDEVIDKVQLVVVSPGVPLTKRPLVLAYKKGVEVIGEIELAYRFCKSKNIVAITGTNG
KTTTTTLVGEILKKQYEDVVVCGNIGLPFIDTIETSSEDTIFVLEISSFQLETIKYFKPR
VGCILNITPDHLNRHITMENYIKAKMRIFENIDEKGYTVLNYDNDITRDLIGVAKGNVIV
FSKTRVQFENVVFVEDDIIYFTIDRKTQKIMKKDEIFIPGQHNLENALAAISCTLPFGIE
KNTIKQVLKTFKGVEHRIEFVAEINGIKFYNDSKGTNTDAAEKALNAFENPIILIAGGYD
KGESFEKFASLVAKKAKKVFLLGQTKQKIASELEKNGYKNFELVSNLKEAVKKSFECAQN
GDIILLSPACASWDMFENYEQRGRIFKEYVNELLTTGM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttggatttaatagggaaaaatgttttgatagtaggtcttggtaaaagtggattggcttgt
gcacaatttttaaaaaaatatggtgcttttgtgataggttttgatgaaaaggcagaagaa
cagttcaaagaagaagatagaaattgtgcagaaaagtactgtgacgaaatctattattgt
gagattcccgatgaggtgattgacaaggttcagcttgttgttgttagtcctggcgtgcca
cttaccaaaagacctttggtgcttgcttataaaaaaggtgttgaggttattggtgagatt
gagcttgcatataggttctgtaaaagtaaaaatattgttgctatcacaggtacaaatggt
aaaacaacaaccacaactcttgtaggagaaattttaaaaaaacagtatgaagatgttgtt
gtatgtggaaacattggtctaccatttattgatacaatagaaacatcaagtgaagatact
atttttgtgcttgagatatcaagttttcagcttgaaactattaaatatttcaaaccaaga
gttggatgtattctcaatatcacccctgaccatctaaacagacatataacaatggagaat
tatataaaagcaaagatgagaatattcgaaaatatagatgaaaagggatatacagttctc
aactatgacaatgacataacccgtgatttaattggagtggcaaaagggaatgttatagta
ttttcaaaaacaagggttcagtttgaaaatgtagtatttgttgaagacgatataatttat
tttaccattgatagaaaaacacaaaaaattatgaaaaaagacgaaatatttataccgggt
caacataatttagagaatgctcttgcagcaattagttgtactttgccgtttggaatagaa
aaaaatacgattaagcaagttctcaagacttttaaaggtgttgaacaccgcatagaattt
gtggcagaaataaatggtataaaattttataatgattcaaaaggtacaaacactgatgct
gctgaaaaggcactcaatgcttttgaaaacccaataattttaattgccggcgggtatgac
aagggagaaagtttcgagaaatttgcaagcttagttgctaagaaggctaaaaaagtattt
ttacttggtcagacaaaacaaaagattgccagtgaacttgagaaaaacggatataaaaac
tttgagcttgtttcaaacttgaaagaagcggttaaaaagagctttgaatgtgctcaaaat
ggtgatattatacttctgtcacctgcatgtgcaagctgggatatgtttgaaaactatgag
caaagaggaaggatatttaaagaatatgtaaatgagcttttaacaacagggatgtga
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