Caldicellulosiruptor diazotrophicus: CaldiYA01_16990
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Entry
CaldiYA01_16990 CDS
T08057
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia00550
Peptidoglycan biosynthesis
cdia01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CaldiYA01_16990 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdia01011
]
CaldiYA01_16990 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cdia01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CaldiYA01_16990 (spoVD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
BCS81739
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All DBs
Position
complement(1750007..1752166)
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AA seq
719 aa
AA seq
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MKEASIKIKKRILFIMSVFFLSFVMLVGRLFYLQLIKGEELKKRAFSQWTRERLVAPKRG
SIVDRNGKILAMSITAETVVASLNQIKEKEWTAKVLSGILQMDYQKILKKLNTKGVSDIY
IARNIDKEKADKIRKYALPGIYLTGGTKRVYPNGNFLAQVLGFTGIDDQGLSGLELYYDK
YLRGKPGAISAQTDASGRAAPFSEEFFKKPVDGYDLMLTIDETIQHFAEKYAQKALYDNK
AKSVTIIVEKVKTGEILAMTSKPDFDPNKPFDLIYKDRFPDFDKLSQAEKNKIVQSMWKN
RALTDTYEPGSTFKIVTAAAGLEEGVVNENSQFYCKGYVKVANATIKCWRYYNPHGSENF
VEGVQNSCNPVFIEVGQRLGKEKLYKYINLFGFGQKTGIDLPGEAKGIVQPLSKIGPVEL
ATISFGQGISATPIQVISMINAVANDGVWVQPHVVKAIYDKDKKLIKSFDSPKKRRVLHQ
DVARRLKIMLQSVVTNGTGHNAYLLGYKVAGKTGTSQKYDKTSKKYIASFGGFAPADNPE
VSVLVIIDEPDPSLYYGGLIAAPVARDLLNDILRYLDVQPQYTAEELKQIELYKEFIVPN
TIGMNVGDAKKEINNNKFNARVIGNGDKVIDQVPKAGFMLKEGSTIILFTQEMSQTTVIV
PNVVGLSAQDAQKVLSNSLLNIKVKGMKGKIIRQNPQPGTKVPIGSIVEVEIADKENAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaagcatctataaagataaaaaagagaattctttttattatgtcagtgtttttt
ttaagctttgtaatgctggtgggacggcttttttatcttcaactaataaaaggtgaagaa
cttaaaaaaagagctttttcacaatggacgcgggaaaggcttgttgcacccaaaagagga
agtattgtggatagaaatggcaagatcttagcgatgtcaattacagctgaaacggttgtt
gcatctttgaatcaaatcaaagaaaaagagtggactgctaaagtgttatctggtatttta
cagatggattatcaaaaaattttaaaaaagctaaatacaaagggagtttcagatatttac
atagcacgcaatattgacaaagagaaggcagataagataagaaaatatgctctgccaggg
atttatttgacaggtgggacaaaaagggtgtatccaaacggtaattttctggctcaggtt
cttggctttacagggattgacgaccaaggactgtctgggcttgaactttattatgataag
tatcttcgcggcaaaccaggtgccatttcagcccagactgatgcaagtggcagagctgct
ccattttcagaagagttttttaaaaagcctgtcgatggctatgacctgatgcttacaatt
gacgaaacaatacagcattttgctgaaaagtatgcacaaaaagctctttatgataacaaa
gcaaagagtgtaaccattattgttgagaaagtcaaaacaggcgagattttagctatgacc
tccaaacctgattttgaccccaataaaccatttgatcttatatacaaagacaggtttcct
gactttgataaactatctcaagctgaaaagaacaagatagtccagtcaatgtggaaaaac
agagcactgacagacacatacgagcccggttcaacatttaagatagtcaccgcagctgca
gggcttgaagaaggggttgttaatgaaaattctcaattttattgcaaaggatatgtcaag
gttgcaaatgcaacgataaaatgttggaggtattacaatccacacggcagtgaaaacttt
gttgaaggtgttcaaaattcttgcaaccctgtattcatagaagtgggacaaaggctggga
aaagagaaactctacaagtatataaatctttttgggtttggtcaaaagactggaatagac
cttcccggtgaggcaaaagggattgttcagccactgagtaagattgggcctgttgaactt
gcaacaatttcttttggtcagggaatttcagcaactccaattcaggttatcagtatgata
aatgcagttgcaaatgacggtgtgtgggtccagcctcatgttgtaaaggccatatatgat
aaggacaaaaaactgataaagtcttttgacagcccgaaaaaaagaagagttttgcaccag
gacgttgcacgaaggcttaaaataatgcttcagtctgttgtgacaaacggtacaggtcac
aatgcttatcttttgggctataaagttgcagggaaaacaggaacttcgcaaaagtacgac
aaaacatctaaaaagtatatagcatcatttggggggtttgcgccggccgacaatcccgag
gtgtcagttcttgtcattatagatgagcctgacccttcactttattatggaggtcttata
gccgcaccagttgcaagagacttattaaatgatatactcagatatttggatgtccagcca
cagtatacagctgaggagttaaaacagatagagctatataaagagtttatagttccaaac
acaatcggaatgaatgttggggatgcaaagaaagaaattaacaataacaaatttaatgca
agggtcataggaaatggtgacaaggtgattgaccaggttccaaaagctgggtttatgttg
aaagaaggttcaacaataatattgttcactcaagaaatgtcacaaacaactgtaattgtt
cccaatgtagtgggcttgagtgcacaggatgcacaaaaggtgctttcaaatagtcttctc
aacataaaagttaaaggaatgaaaggaaagattataagacaaaatccacagccagggaca
aaagtcccaataggttcaattgttgaggttgaaattgctgataaagaaaatgcagaatag
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