Caldicellulosiruptor diazotrophicus: CaldiYA01_17370
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Entry
CaldiYA01_17370 CDS
T08057
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CaldiYA01_17370 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdia03021
]
CaldiYA01_17370 (sigA)
Transcription machinery [BR:
cdia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CaldiYA01_17370 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF4423
Motif
Other DBs
NCBI-ProteinID:
BCS81777
UniProt:
A0ABN6E8G0
LinkDB
All DBs
Position
complement(1791293..1792546)
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AA seq
417 aa
AA seq
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MPEQNMENNEVKKLNGENINKNNENENRQEVDEQLFVSQKNENQEKQSGKKSSENKSESK
KISEEKKTLIREKVRELISLGQSKGFLTYSEIQEILDKVELDASQIENIYDTLESMGIDV
VDDRVSEEELLKDDLENLPEGIAIDDPVRMYLKEIGKIPLLTPEEEIELAKRIEQGDEEA
KKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLLKAVEKFDYRKGYKFSTYATWWI
RQAITRAIADQARTIRIPVHMVETINKLVRVSRQLLQEKGREPTPEEIAKEMNMPVEKVR
EILKIAQEPVSLETPIGEEEDSHLGDFIPDDDALAPSEAAAYSMLKEQLLEVLDSLNERE
KKVLKLRFGLEDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDFLE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcagaacatggagaacaatgaggtaaaaaaactcaatggggaaaatataaat
aaaaataatgagaacgaaaatcgacaagaagttgatgaacaattgtttgtatcacagaaa
aatgaaaatcaggaaaagcagtctggtaaaaagagttcagaaaataaatcagaaagtaag
aaaataagtgaggaaaagaagacacttatacgagagaaggtcagggagttaatatcactt
ggtcagagcaaaggttttctgacatattctgaaatacaggaaattcttgacaaggtagag
cttgatgcaagccagattgagaacatttatgataccttagagagtatgggaattgatgtg
gttgacgacagagtatctgaagaggagcttttaaaagacgacttggaaaatctacctgaa
ggtattgctatagatgaccctgttagaatgtatctcaaagagattggcaaaattcctctt
ttgacaccagaagaggagattgaacttgcaaagaggattgaacagggcgatgaagaggca
aaaaagaggcttgctgaggcaaacttgaggcttgttgttagcattgcaaaaagatatgta
ggacgtggaatgttattcttagacctgattcaagaaggtaatttgggacttttaaaagca
gttgagaagtttgactacagaaagggctataaattctcaacatatgcaacctggtggatt
cgccaggcaataacaagagcaattgccgaccaggcaagaactataagaattcctgttcat
atggttgagacaataaacaagttagttagggtatcacgccagcttcttcaagaaaaagga
agagagccaacgcctgaagagattgcaaaagagatgaacatgcctgttgaaaaggtgcgt
gagattttgaagattgctcaggagcctgtatcattggaaacgccaatcggtgaggaagaa
gacagccacttgggtgactttatccctgatgatgatgctcttgcaccatctgaagcagct
gcatattcaatgttaaaagagcagcttttagaggttttggattctttgaacgaaagagaa
aagaaggttttaaagctcagatttggccttgaagatggcagggcccgcaccttggaagaa
gttggcaaggagttcaacgtgacacgtgaaagaattcgtcaaattgaggcaaaggctttg
agaaaactcagacatccaagcaggagtaagaagcttaaggattttttggaatag
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