Caldicellulosiruptor diazotrophicus: CaldiYA01_18060
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Entry
CaldiYA01_18060 CDS
T08057
Symbol
hbs
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
cdia
Caldicellulosiruptor diazotrophicus
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdia03032
]
CaldiYA01_18060 (hbs)
03036 Chromosome and associated proteins [BR:
cdia03036
]
CaldiYA01_18060 (hbs)
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_18060 (hbs)
DNA replication proteins [BR:
cdia03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CaldiYA01_18060 (hbs)
Chromosome and associated proteins [BR:
cdia03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CaldiYA01_18060 (hbs)
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CaldiYA01_18060 (hbs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF2267
NNH1
DUF4836
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
BCS81846
LinkDB
All DBs
Position
complement(1860786..1861061)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTDLISAMAEKSGLTKKDAEKALNAFVDAVTEALSKGEKVQLVGFGSFEVRERAERVG
RNPQTQEEIKIPATKVPVFKAGKMLKDAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagatttgatttcggcaatggcagagaagagtggtcttacaaagaaggat
gctgagaaggcactaaatgcgtttgtagatgctgtaacagaagcactctctaagggggaa
aaggttcagcttgttggttttggttcatttgaggtaagagagagagcggaaagagttggt
agaaatcctcaaactcaagaagagataaagattccagcaacaaaggtccctgtgttcaaa
gcaggtaaaatgttgaaagatgctgttgcaaaatag
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