Caldicellulosiruptor diazotrophicus: CaldiYA01_19990
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Entry
CaldiYA01_19990 CDS
T08057
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cdia03009
]
CaldiYA01_19990
Enzymes [BR:
cdia01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CaldiYA01_19990
Ribosome biogenesis [BR:
cdia03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CaldiYA01_19990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_11
MTS
Motif
Other DBs
NCBI-ProteinID:
BCS82039
LinkDB
All DBs
Position
complement(2079282..2080637)
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AA seq
451 aa
AA seq
DB search
MVKKSQEYIVKIDTLNHQAQGIARIDGFVVFVDNALIDEVVKIKIEKVKKEYAKANLVEI
LEKSPYRKDPECPYYDFCGGCHLMHVKYQHQLSLKKLLVEDAFKRIGKLSTKINDVIGME
NPFRYRNKTALPVGGNYKKPQIGFYKKMTHDIVDIDYCLIQHEFCDDVIKGMKELIKKHK
IDIYDEKKHQGVLRHIVVRNSFAFNEMMIIFVCTKVPENLEAIKKDILDKFPKIKSLYLN
LNPKRTNVILGDEDILIWGSSTIKDKIGNLTFEISPKSFFQVNSVQTEVLYSQVVKYLRK
IEAEVVFDIYSGIGTISMFIAPFCKKVYAIELVRDAVEDAKKSSNGNGILNIEFICGRAE
IEIPKLLKSGIIPQAVILDPPRSGCEKQLLESLVEHKISNIIYVSCNPSTLARDANILCS
GGYEVVEVQPVDMFPQTFHVECVALFKKRNA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaaaaatcacaagagtatattgttaagattgatacgcttaatcaccaggcacag
gggattgcaagaattgatgggtttgtagtgtttgttgacaatgctttaattgatgaggtt
gtaaaaatcaaaatagaaaaggtaaaaaaagagtatgccaaagcaaacttagttgaaatt
ttagaaaaaagcccatatagaaaagaccctgaatgcccttattatgacttttgtggcggt
tgtcatttgatgcatgtaaaataccagcatcagctaagcctaaaaaagcttcttgttgaa
gatgcttttaagcggatagggaagctcagcactaaaataaatgatgttattggaatggaa
aacccatttagatacagaaacaaaactgcactaccagttggaggaaattataaaaaaccc
caaataggattttataaaaagatgacacatgatattgttgatatagattactgtcttatt
cagcatgagttttgcgatgatgtgataaaaggtatgaaagagctgataaaaaaacacaag
atagatatttacgacgaaaaaaagcatcaaggtgttttgaggcacattgttgttagaaat
tcgtttgcatttaatgagatgatgatcatttttgtttgcacaaaagtacctgagaattta
gaggctatcaaaaaagacattttagacaagtttcccaaaattaaatcactctatttaaac
ttgaaccctaaaaggacaaatgtaattctgggggatgaagacatattaatttggggcagt
agcacaataaaagataagatagggaatttaacatttgaaatttctccaaaatcatttttt
caggtaaattctgtacaaacagaggtgctctacagtcaggtagtaaaatatctgcgtaaa
attgaagcagaagttgtatttgacatatactctgggataggcaccatttcaatgttcatt
gctcctttttgcaaaaaggtttacgctatagagttagttagagatgcagttgaagatgct
aaaaaaagcagcaatggtaacggtattttgaacattgaatttatatgtggccgtgcagag
attgaaatcccaaaactattgaaaagcggaattataccccaggctgtgattcttgaccca
ccgcgaagtggatgtgaaaaacagcttttagaaagcttggtagagcataaaatttcaaac
ataatttatgtgtcctgcaatccttcaacgcttgcaagagatgctaacatactttgttcg
ggtggctatgaggttgtagaagttcagcctgttgatatgtttcctcagacatttcatgtt
gagtgtgtggctttatttaaaaagcgcaatgcttaa
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