Caldicellulosiruptor diazotrophicus: CaldiYA01_20340
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Entry
CaldiYA01_20340 CDS
T08057
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cdia
Caldicellulosiruptor diazotrophicus
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cdia03000
]
CaldiYA01_20340
Transcription factors [BR:
cdia03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CaldiYA01_20340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_24
HTH_23
MarR_2
HTH_11
HTH_38
HTH_10
HTH_19
HTH_Tnp_ISL3
HTH_IclR
HTH_Crp_2
MarR
HTH_28
HTH_5
HTH_29
HTH_26
HTH_AraC
Sigma70_r4_2
HTH_7
HTH_36
SpoIIID
HTH_AsnC-type
Fe_dep_repress
HTH_31
Sigma70_r4
KorB
HTH_50
Crp
Sigma54_DBD
Phage_terminase
Sigma70_r3
HTH_8
HTH_17
TetR_N
Xre-like-HTH
TnsD
MerR
Motif
Other DBs
NCBI-ProteinID:
BCS82074
LinkDB
All DBs
Position
complement(2120486..2121505)
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AA seq
339 aa
AA seq
DB search
MRKNKNVTIKDIAKALGLSPSTVSRALNNYSDINPETRDKVIEMAKKLNYTPNIFAKSLV
TNKTKRVGLFIEDMEREGIYGVFYYEILISFRKAAMDNGYEVVLLSTSSEEQKRISFDAV
MQEKGLEGAFIMGLKMDDEYLNEIQKSTYPVVLLDIPIKNSNIGYVTTNNLKGAQLATEH
LINLGHKKIGFLNGHKKAYVSQERLNGYILALSKNGLQVDSELIYEGDFTEASGFEAADY
FIKKGVTAVFAASDMMAIGLIKRLKELGVDVPKKVSVVGFDDISLARYITPTLTTIRQNK
SEMGKSAFYLLLNLISKQPINHIILEPELIKRESTARLR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagaacaagaatgtgaccataaaagatattgcaaaagctttgggactgtcacca
agcactgtttcaagggcgctcaataattactcagatataaaccctgaaacaagagacaag
gtaatagagatggccaaaaaactaaactacacaccaaacatctttgcaaaaagccttgtc
acaaacaagacaaaaagagttggactgttcattgaagacatggagagggaaggcatatac
ggtgttttttattatgagatacttataagtttcaggaaagctgcaatggacaatggttat
gaggttgttttgctctcaacatcttcagaggagcaaaaaagaatctcttttgatgcggtt
atgcaggaaaaagggcttgaaggcgcatttatcatgggacttaagatggatgatgagtat
ctgaatgaaatacaaaaaagtacctatcctgttgttttgcttgacattccaataaaaaac
tcaaatataggttatgtgacaacaaacaatctaaaaggtgcgcagcttgcaacagaacac
ttgattaaccttggacacaaaaaaataggatttttgaatggtcacaaaaaagcatatgtc
agccaagaaagattaaacggttatatattggcactgagcaaaaacggacttcaggttgac
agtgaacttatttatgaaggtgattttacagaggcaagcgggtttgaagcagcagactat
tttattaaaaaaggtgtcacagcagtttttgctgcatcagacatgatggcaatcggtctt
ataaaaagattaaaggaacttggtgtggatgtgcctaaaaaagtttcggttgttggattt
gacgatatatccttggcacgttacatcacccctactcttacaacaataagacagaacaag
agtgaaatgggcaaatcagctttttacctgcttttaaacctgatttcaaagcagcccata
aaccacattatcttagagccagagcttataaaaagagaatcaacagcaaggctgcgctaa
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