KEGG   Caldicellulosiruptor diazotrophicus: CaldiYA01_20900
Entry
CaldiYA01_20900   CDS       T08057                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cdia  Caldicellulosiruptor diazotrophicus
Pathway
cdia03420  Nucleotide excision repair
cdia03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CaldiYA01_20900
   03430 Mismatch repair
    CaldiYA01_20900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdia03400]
    CaldiYA01_20900
Enzymes [BR:cdia01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CaldiYA01_20900
DNA repair and recombination proteins [BR:cdia03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CaldiYA01_20900
   MMR (mismatch excision repair)
    Other MMR factors
     CaldiYA01_20900
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 LysM3_LYK4_5
Other DBs
NCBI-ProteinID: BCS82130
LinkDB
Position
complement(2187641..2190496)
AA seq 951 aa
MGNTIIYSASAGCGKTESIANLYIDLINSQKALPSEIVCITYTEKAARELKNRIISKAKQ
KGLDLLTISKIQNSHIKTIHSFCMYLLRFYWAWARVDANFKIVPEQNRIMLKLIDNYLSV
FPATLGRLPQEKFFIEEYLHYIENIAQEFNNSSKYINKAYHLESETFYIFDHLSNSLNNM
FLKELTYDLVLQRTFELLNIPEVNKDVKTRFKYLIVDEFQDSNFLQKSIFENIAENIYYV
GDKKQSIYRFQGAEPEVFDEAMESCSQVLELCENFRTNSELGKKIDRISSMLFPNYKPLS
YKHQADGFLKVVEIVNPTREEIIQNEAIYVAKKIKEMVESGFEISVGGKPKRKVKYSDFA
VLSRKIQNIAHIYKRVFEDYDVPIDINFKRGLLEQKEIVPLLGLLEILQYPNKKSGYLRL
LANDIFKVDRFTLLFCEMSKIECYVPEDVLKFIAKQRDNLFVKKISEILYEFEDMFEYSY
KVYKFFGKGAYENVRLFYDLAEESKSFSIEDLCSFVNYQGERFSSFSSLDDSAVLLSIHS
AKGLSFPIVFLVGLCESTGYFPGRSPKLRGSYDTDTREYIIAPFWMEKEYTKIKNISKQQ
EKEELKRLFYVAITRPMAGIFMINSTVREAIKKRGGAKSFGEEVGLNYILAKAEEIGIEK
EVVEIKNTEEDPSNDFACKQKNTISSALPLMILPDEFENRFKFLSPSHIMDFKRCPAMFS
LKYIMGLPVFDELSSKEEIQQNAKVLGTTVHRVLELTSLKNIQSLDSNIALAMLENNFED
EKVVKELILNFFESQFVKEIKDKVIKEESEYPFYFKLDNQMIYGIIDKVYHLKDEVLLVD
FKTNLHFDDTKFNIYIPQLFIYTKAMKERFPSKKIFSSIFWLREGKKFDYEQKDEHLEDV
IDVIKKIRNIRTRKDVLELIEDSLDGNCNGCEYEFYCKDEQNIKLIRKKLE
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgggcaatacaattatttatagtgcatctgctggctgtggcaagacagaaagtatagca
aacctttatatagaccttataaattctcaaaaagctttgccaagtgaaattgtctgcata
acgtatacagaaaaggcagcaagagagcttaagaacagaatcatctcaaaagccaagcag
aaagggcttgatttgctcacaatttcaaagattcaaaactcccatattaagaccatacat
tcattttgtatgtatcttttaagattttactgggcatgggcaagggttgatgcaaacttt
aaaattgttcctgagcagaatagaattatgctaaaactcatagacaattatctttcagtt
tttcctgcaacattggggagattgcctcaggaaaagttttttatagaagaatatcttcac
tatattgaaaatatagcacaggaattcaacaattcatcaaaatatatcaacaaagcttat
caccttgaaagcgaaactttttatatttttgatcatctatcaaacagtttaaataacatg
tttttaaaagaacttacatacgatttggtcttgcaaagaacctttgaacttttgaacatt
ccagaagtaaataaagatgtaaaaacaagatttaagtacttaattgttgacgagtttcaa
gactcaaactttttacaaaaatcaatcttcgagaatatagctgaaaacatttattatgtt
ggagataaaaaacagtccatttaccgttttcagggtgcagagccagaggtttttgatgag
gcaatggaaagctgcagccaggttttagagctctgtgaaaactttagaacaaactctgag
cttggcaaaaagatagataggataagcagcatgctttttccaaactacaaaccactttct
tataagcatcaagctgacggatttttaaaggttgtggagattgtaaatccaacaagagaa
gagattattcaaaatgaagctatttatgttgcaaaaaagataaaagagatggttgaaagt
ggttttgagataagtgtgggtggcaagccaaaaagaaaggtgaaatactctgactttgca
gtgctgtcgcgaaaaattcaaaacattgctcatatttacaaaagggtgtttgaggattat
gatgttccaattgatattaacttcaaaagagggcttttggaacaaaaagagatagtgccg
cttttgggccttcttgagattttacaatatccgaacaaaaaatcagggtacttgagactt
cttgcaaatgacatatttaaagtggacagattcacgcttctcttttgcgagatgagtaaa
atagaatgttatgttccagaagatgttttaaaatttattgcaaaacagcgtgataacctg
tttgtcaaaaagatttcagagattttgtatgagtttgaagacatgttcgaatatagctac
aaggtctacaagttttttggcaagggtgcatacgaaaatgtcagacttttttatgacttg
gcagaagagagcaaaagcttttcgatagaagacctttgcagttttgtaaattatcaaggc
gaaaggttttcgagcttttcttctcttgatgatagcgcagtattgcttagcatacattca
gcaaaaggactcagctttccaatagtgtttttggtcggactttgcgaaagtacagggtac
tttccgggcagaagtccaaagctgagaggttcttatgacacagacacaagagaatatata
attgctcctttttggatggaaaaagaatacacaaaaataaagaatatatcaaaacagcag
gaaaaagaagaacttaaaaggcttttttatgttgccataacaagaccgatggcagggatt
tttatgataaactcaactgtaagagaagctataaagaaaagaggaggagcaaagtcgttt
ggtgaagaggtaggtttgaattacattctcgcaaaggcagaagagattggaattgaaaag
gaagtcgtggagataaaaaacactgaagaagatccatctaatgattttgcttgtaaacag
aaaaatacaattagcagtgcattacctctaatgattttgcctgacgagtttgaaaatagg
tttaagtttttgtcaccctcacacataatggattttaaaagatgccctgccatgttttcg
ttaaagtacatcatgggtcttccagtttttgatgagctgagctcaaaagaggagatacaa
cagaacgcaaaagtacttggtaccacagtgcatagagttttagagctcacaagcttgaaa
aatattcaaagcttagatagcaacattgccttagccatgcttgaaaataactttgaggat
gaaaaggttgtgaaagaacttattttgaacttttttgaaagccagtttgtaaaagaaatc
aaagataaagtaataaaagaagaaagcgagtacccgttttattttaaacttgacaatcaa
atgatatatggcataattgacaaggtgtaccatttaaaagatgaggttttacttgttgat
tttaaaacaaaccttcattttgatgatacaaaattcaatatttacattccccagcttttc
atttacacaaaagccatgaaagagagatttccttccaaaaagattttttcttccatcttc
tggttaagagaagggaaaaagtttgactatgagcaaaaagatgaacaccttgaagatgta
attgatgtgataaagaaaataagaaatatcagaaccagaaaggatgtacttgagcttatt
gaggattctttagatggaaattgcaatggctgtgaatatgaattttactgtaaggatgag
caaaatattaaattgataaggaaaaagcttgaatag

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