Caldicellulosiruptor diazotrophicus: CaldiYA01_20900
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Entry
CaldiYA01_20900 CDS
T08057
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdia
Caldicellulosiruptor diazotrophicus
Pathway
cdia03420
Nucleotide excision repair
cdia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CaldiYA01_20900
03430 Mismatch repair
CaldiYA01_20900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdia03400
]
CaldiYA01_20900
Enzymes [BR:
cdia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CaldiYA01_20900
DNA repair and recombination proteins [BR:
cdia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CaldiYA01_20900
MMR (mismatch excision repair)
Other MMR factors
CaldiYA01_20900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
BCS82130
UniProt:
A0ABM7NPN6
LinkDB
All DBs
Position
complement(2187641..2190496)
Genome browser
AA seq
951 aa
AA seq
DB search
MGNTIIYSASAGCGKTESIANLYIDLINSQKALPSEIVCITYTEKAARELKNRIISKAKQ
KGLDLLTISKIQNSHIKTIHSFCMYLLRFYWAWARVDANFKIVPEQNRIMLKLIDNYLSV
FPATLGRLPQEKFFIEEYLHYIENIAQEFNNSSKYINKAYHLESETFYIFDHLSNSLNNM
FLKELTYDLVLQRTFELLNIPEVNKDVKTRFKYLIVDEFQDSNFLQKSIFENIAENIYYV
GDKKQSIYRFQGAEPEVFDEAMESCSQVLELCENFRTNSELGKKIDRISSMLFPNYKPLS
YKHQADGFLKVVEIVNPTREEIIQNEAIYVAKKIKEMVESGFEISVGGKPKRKVKYSDFA
VLSRKIQNIAHIYKRVFEDYDVPIDINFKRGLLEQKEIVPLLGLLEILQYPNKKSGYLRL
LANDIFKVDRFTLLFCEMSKIECYVPEDVLKFIAKQRDNLFVKKISEILYEFEDMFEYSY
KVYKFFGKGAYENVRLFYDLAEESKSFSIEDLCSFVNYQGERFSSFSSLDDSAVLLSIHS
AKGLSFPIVFLVGLCESTGYFPGRSPKLRGSYDTDTREYIIAPFWMEKEYTKIKNISKQQ
EKEELKRLFYVAITRPMAGIFMINSTVREAIKKRGGAKSFGEEVGLNYILAKAEEIGIEK
EVVEIKNTEEDPSNDFACKQKNTISSALPLMILPDEFENRFKFLSPSHIMDFKRCPAMFS
LKYIMGLPVFDELSSKEEIQQNAKVLGTTVHRVLELTSLKNIQSLDSNIALAMLENNFED
EKVVKELILNFFESQFVKEIKDKVIKEESEYPFYFKLDNQMIYGIIDKVYHLKDEVLLVD
FKTNLHFDDTKFNIYIPQLFIYTKAMKERFPSKKIFSSIFWLREGKKFDYEQKDEHLEDV
IDVIKKIRNIRTRKDVLELIEDSLDGNCNGCEYEFYCKDEQNIKLIRKKLE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatacaattatttatagtgcatctgctggctgtggcaagacagaaagtatagca
aacctttatatagaccttataaattctcaaaaagctttgccaagtgaaattgtctgcata
acgtatacagaaaaggcagcaagagagcttaagaacagaatcatctcaaaagccaagcag
aaagggcttgatttgctcacaatttcaaagattcaaaactcccatattaagaccatacat
tcattttgtatgtatcttttaagattttactgggcatgggcaagggttgatgcaaacttt
aaaattgttcctgagcagaatagaattatgctaaaactcatagacaattatctttcagtt
tttcctgcaacattggggagattgcctcaggaaaagttttttatagaagaatatcttcac
tatattgaaaatatagcacaggaattcaacaattcatcaaaatatatcaacaaagcttat
caccttgaaagcgaaactttttatatttttgatcatctatcaaacagtttaaataacatg
tttttaaaagaacttacatacgatttggtcttgcaaagaacctttgaacttttgaacatt
ccagaagtaaataaagatgtaaaaacaagatttaagtacttaattgttgacgagtttcaa
gactcaaactttttacaaaaatcaatcttcgagaatatagctgaaaacatttattatgtt
ggagataaaaaacagtccatttaccgttttcagggtgcagagccagaggtttttgatgag
gcaatggaaagctgcagccaggttttagagctctgtgaaaactttagaacaaactctgag
cttggcaaaaagatagataggataagcagcatgctttttccaaactacaaaccactttct
tataagcatcaagctgacggatttttaaaggttgtggagattgtaaatccaacaagagaa
gagattattcaaaatgaagctatttatgttgcaaaaaagataaaagagatggttgaaagt
ggttttgagataagtgtgggtggcaagccaaaaagaaaggtgaaatactctgactttgca
gtgctgtcgcgaaaaattcaaaacattgctcatatttacaaaagggtgtttgaggattat
gatgttccaattgatattaacttcaaaagagggcttttggaacaaaaagagatagtgccg
cttttgggccttcttgagattttacaatatccgaacaaaaaatcagggtacttgagactt
cttgcaaatgacatatttaaagtggacagattcacgcttctcttttgcgagatgagtaaa
atagaatgttatgttccagaagatgttttaaaatttattgcaaaacagcgtgataacctg
tttgtcaaaaagatttcagagattttgtatgagtttgaagacatgttcgaatatagctac
aaggtctacaagttttttggcaagggtgcatacgaaaatgtcagacttttttatgacttg
gcagaagagagcaaaagcttttcgatagaagacctttgcagttttgtaaattatcaaggc
gaaaggttttcgagcttttcttctcttgatgatagcgcagtattgcttagcatacattca
gcaaaaggactcagctttccaatagtgtttttggtcggactttgcgaaagtacagggtac
tttccgggcagaagtccaaagctgagaggttcttatgacacagacacaagagaatatata
attgctcctttttggatggaaaaagaatacacaaaaataaagaatatatcaaaacagcag
gaaaaagaagaacttaaaaggcttttttatgttgccataacaagaccgatggcagggatt
tttatgataaactcaactgtaagagaagctataaagaaaagaggaggagcaaagtcgttt
ggtgaagaggtaggtttgaattacattctcgcaaaggcagaagagattggaattgaaaag
gaagtcgtggagataaaaaacactgaagaagatccatctaatgattttgcttgtaaacag
aaaaatacaattagcagtgcattacctctaatgattttgcctgacgagtttgaaaatagg
tttaagtttttgtcaccctcacacataatggattttaaaagatgccctgccatgttttcg
ttaaagtacatcatgggtcttccagtttttgatgagctgagctcaaaagaggagatacaa
cagaacgcaaaagtacttggtaccacagtgcatagagttttagagctcacaagcttgaaa
aatattcaaagcttagatagcaacattgccttagccatgcttgaaaataactttgaggat
gaaaaggttgtgaaagaacttattttgaacttttttgaaagccagtttgtaaaagaaatc
aaagataaagtaataaaagaagaaagcgagtacccgttttattttaaacttgacaatcaa
atgatatatggcataattgacaaggtgtaccatttaaaagatgaggttttacttgttgat
tttaaaacaaaccttcattttgatgatacaaaattcaatatttacattccccagcttttc
atttacacaaaagccatgaaagagagatttccttccaaaaagattttttcttccatcttc
tggttaagagaagggaaaaagtttgactatgagcaaaaagatgaacaccttgaagatgta
attgatgtgataaagaaaataagaaatatcagaaccagaaaggatgtacttgagcttatt
gaggattctttagatggaaattgcaatggctgtgaatatgaattttactgtaaggatgag
caaaatattaaattgataaggaaaaagcttgaatag
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