Entry |
|
Name |
(GenBank) hypothetical protein
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KO |
|
Organism |
cdia Caldicellulosiruptor diazotrophicus
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cdia00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CaldiYA01_20900
03430 Mismatch repair
CaldiYA01_20900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cdia03400]
CaldiYA01_20900
Enzymes [BR:cdia01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CaldiYA01_20900
DNA repair and recombination proteins [BR:cdia03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CaldiYA01_20900
MMR (mismatch excision repair)
Other MMR factors
CaldiYA01_20900
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2187641..2190496)
|
AA seq |
951 aa
MGNTIIYSASAGCGKTESIANLYIDLINSQKALPSEIVCITYTEKAARELKNRIISKAKQ
KGLDLLTISKIQNSHIKTIHSFCMYLLRFYWAWARVDANFKIVPEQNRIMLKLIDNYLSV
FPATLGRLPQEKFFIEEYLHYIENIAQEFNNSSKYINKAYHLESETFYIFDHLSNSLNNM
FLKELTYDLVLQRTFELLNIPEVNKDVKTRFKYLIVDEFQDSNFLQKSIFENIAENIYYV
GDKKQSIYRFQGAEPEVFDEAMESCSQVLELCENFRTNSELGKKIDRISSMLFPNYKPLS
YKHQADGFLKVVEIVNPTREEIIQNEAIYVAKKIKEMVESGFEISVGGKPKRKVKYSDFA
VLSRKIQNIAHIYKRVFEDYDVPIDINFKRGLLEQKEIVPLLGLLEILQYPNKKSGYLRL
LANDIFKVDRFTLLFCEMSKIECYVPEDVLKFIAKQRDNLFVKKISEILYEFEDMFEYSY
KVYKFFGKGAYENVRLFYDLAEESKSFSIEDLCSFVNYQGERFSSFSSLDDSAVLLSIHS
AKGLSFPIVFLVGLCESTGYFPGRSPKLRGSYDTDTREYIIAPFWMEKEYTKIKNISKQQ
EKEELKRLFYVAITRPMAGIFMINSTVREAIKKRGGAKSFGEEVGLNYILAKAEEIGIEK
EVVEIKNTEEDPSNDFACKQKNTISSALPLMILPDEFENRFKFLSPSHIMDFKRCPAMFS
LKYIMGLPVFDELSSKEEIQQNAKVLGTTVHRVLELTSLKNIQSLDSNIALAMLENNFED
EKVVKELILNFFESQFVKEIKDKVIKEESEYPFYFKLDNQMIYGIIDKVYHLKDEVLLVD
FKTNLHFDDTKFNIYIPQLFIYTKAMKERFPSKKIFSSIFWLREGKKFDYEQKDEHLEDV
IDVIKKIRNIRTRKDVLELIEDSLDGNCNGCEYEFYCKDEQNIKLIRKKLE |
NT seq |
2856 nt +upstreamnt +downstreamnt
atgggcaatacaattatttatagtgcatctgctggctgtggcaagacagaaagtatagca
aacctttatatagaccttataaattctcaaaaagctttgccaagtgaaattgtctgcata
acgtatacagaaaaggcagcaagagagcttaagaacagaatcatctcaaaagccaagcag
aaagggcttgatttgctcacaatttcaaagattcaaaactcccatattaagaccatacat
tcattttgtatgtatcttttaagattttactgggcatgggcaagggttgatgcaaacttt
aaaattgttcctgagcagaatagaattatgctaaaactcatagacaattatctttcagtt
tttcctgcaacattggggagattgcctcaggaaaagttttttatagaagaatatcttcac
tatattgaaaatatagcacaggaattcaacaattcatcaaaatatatcaacaaagcttat
caccttgaaagcgaaactttttatatttttgatcatctatcaaacagtttaaataacatg
tttttaaaagaacttacatacgatttggtcttgcaaagaacctttgaacttttgaacatt
ccagaagtaaataaagatgtaaaaacaagatttaagtacttaattgttgacgagtttcaa
gactcaaactttttacaaaaatcaatcttcgagaatatagctgaaaacatttattatgtt
ggagataaaaaacagtccatttaccgttttcagggtgcagagccagaggtttttgatgag
gcaatggaaagctgcagccaggttttagagctctgtgaaaactttagaacaaactctgag
cttggcaaaaagatagataggataagcagcatgctttttccaaactacaaaccactttct
tataagcatcaagctgacggatttttaaaggttgtggagattgtaaatccaacaagagaa
gagattattcaaaatgaagctatttatgttgcaaaaaagataaaagagatggttgaaagt
ggttttgagataagtgtgggtggcaagccaaaaagaaaggtgaaatactctgactttgca
gtgctgtcgcgaaaaattcaaaacattgctcatatttacaaaagggtgtttgaggattat
gatgttccaattgatattaacttcaaaagagggcttttggaacaaaaagagatagtgccg
cttttgggccttcttgagattttacaatatccgaacaaaaaatcagggtacttgagactt
cttgcaaatgacatatttaaagtggacagattcacgcttctcttttgcgagatgagtaaa
atagaatgttatgttccagaagatgttttaaaatttattgcaaaacagcgtgataacctg
tttgtcaaaaagatttcagagattttgtatgagtttgaagacatgttcgaatatagctac
aaggtctacaagttttttggcaagggtgcatacgaaaatgtcagacttttttatgacttg
gcagaagagagcaaaagcttttcgatagaagacctttgcagttttgtaaattatcaaggc
gaaaggttttcgagcttttcttctcttgatgatagcgcagtattgcttagcatacattca
gcaaaaggactcagctttccaatagtgtttttggtcggactttgcgaaagtacagggtac
tttccgggcagaagtccaaagctgagaggttcttatgacacagacacaagagaatatata
attgctcctttttggatggaaaaagaatacacaaaaataaagaatatatcaaaacagcag
gaaaaagaagaacttaaaaggcttttttatgttgccataacaagaccgatggcagggatt
tttatgataaactcaactgtaagagaagctataaagaaaagaggaggagcaaagtcgttt
ggtgaagaggtaggtttgaattacattctcgcaaaggcagaagagattggaattgaaaag
gaagtcgtggagataaaaaacactgaagaagatccatctaatgattttgcttgtaaacag
aaaaatacaattagcagtgcattacctctaatgattttgcctgacgagtttgaaaatagg
tttaagtttttgtcaccctcacacataatggattttaaaagatgccctgccatgttttcg
ttaaagtacatcatgggtcttccagtttttgatgagctgagctcaaaagaggagatacaa
cagaacgcaaaagtacttggtaccacagtgcatagagttttagagctcacaagcttgaaa
aatattcaaagcttagatagcaacattgccttagccatgcttgaaaataactttgaggat
gaaaaggttgtgaaagaacttattttgaacttttttgaaagccagtttgtaaaagaaatc
aaagataaagtaataaaagaagaaagcgagtacccgttttattttaaacttgacaatcaa
atgatatatggcataattgacaaggtgtaccatttaaaagatgaggttttacttgttgat
tttaaaacaaaccttcattttgatgatacaaaattcaatatttacattccccagcttttc
atttacacaaaagccatgaaagagagatttccttccaaaaagattttttcttccatcttc
tggttaagagaagggaaaaagtttgactatgagcaaaaagatgaacaccttgaagatgta
attgatgtgataaagaaaataagaaatatcagaaccagaaaggatgtacttgagcttatt
gaggattctttagatggaaattgcaatggctgtgaatatgaattttactgtaaggatgag
caaaatattaaattgataaggaaaaagcttgaatag |