Caldicellulosiruptor diazotrophicus: CaldiYA01_20970
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Entry
CaldiYA01_20970 CDS
T08057
Name
(GenBank) nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
cdia
Caldicellulosiruptor diazotrophicus
Brite
KEGG Orthology (KO) [BR:
cdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdia03019
]
CaldiYA01_20970
Messenger RNA biogenesis [BR:
cdia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CaldiYA01_20970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_24
SKI
DUF6955
AAA_16
DUF6913
AAA
AAA_22
CoaE
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BCS82137
LinkDB
All DBs
Position
complement(2199097..2199969)
Genome browser
AA seq
290 aa
AA seq
DB search
MEIVIITGMSGAGKSLAIRAFEDMGFFCIDNLPPHFLPKIAELASATKEKISRIAAVVDI
RGGEFFDDFKDVLKELKKDNRNFKLLFLDAHDDVLIKRYKETRRKHPLTHEGDGSILEAI
QKERKKLEDVKKYADFVIDTSTLLPKDLKEKLFEIFVQQKSKETMLITIMSFGFKYGLPL
DADLVFDVRFIPNPFYVDTLKHKTGKDPDVKEYVLRWEVTKEFLQKLFDLILFLIPNYAE
EGKGQLVIAIGCTGGKHRSVTVAEELKKTIENQGYKVSIFHRDIEKDIKG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttggagatagtgataataactggcatgtctggcgctggtaagagcttggcaataagggcg
tttgaagacatgggatttttttgcatagacaacttgccaccacactttttacccaaaatt
gctgaacttgcaagtgcaacaaaggagaaaatttcaaggattgctgcggtagtggatatt
cgtggtggagaattttttgatgacttcaaagatgttcttaaggagcttaaaaaagataac
cgcaactttaaactcctctttttagatgcccatgatgatgttcttataaaacgatataaa
gaaacaaggcgaaaacatcctttaactcatgaaggtgacggtagcattttagaagctatt
cagaaagagagaaagaagcttgaggatgtgaaaaaatatgctgattttgtgatcgataca
tcaacccttttaccaaaggatttaaaagaaaaactttttgagatttttgttcaacaaaag
tcaaaagaaacaatgctaatcacaattatgtcttttggtttcaaatacggacttccgctt
gatgccgaccttgtttttgatgttaggttcattccaaacccgttttatgtagatactctc
aaacacaaaacaggcaaggaccctgatgtaaaagaatatgttttaaggtgggaagttaca
aaagaattcttacaaaaactatttgacctgattttatttttaataccaaattatgcagaa
gaaggaaaaggacaacttgtaattgcaattggctgtactggtggtaagcataggtctgta
acagtggctgaagaactaaaaaagactattgaaaatcagggatataaagtgtcaatattt
catagagatatagagaaagatataaaagggtga
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