Corynebacterium diphtheriae NCTC11397: ERS451417_00654
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Entry
ERS451417_00654 CDS
T04861
Symbol
pcrA_1
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdip
Corynebacterium diphtheriae NCTC11397
Pathway
cdip03420
Nucleotide excision repair
cdip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERS451417_00654 (pcrA_1)
03430 Mismatch repair
ERS451417_00654 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdip03400
]
ERS451417_00654 (pcrA_1)
Enzymes [BR:
cdip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERS451417_00654 (pcrA_1)
DNA repair and recombination proteins [BR:
cdip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERS451417_00654 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
ERS451417_00654 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CKG77183
LinkDB
All DBs
Position
1:641511..644741
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AA seq
1076 aa
AA seq
DB search
MLSPQELSRALGQKFPPTPQQADVISSPLAPTLVVAGAGAGKTETMAARVVWLVASGLVD
PDRVLGLTFTRKAAQQLSKRIRDRLEQLAGIENLRDLDPTGALATKLEAIAPTVSTYDSY
AGRLISEYGLLLPVEPSSRLISQTELFQIAHSIVSAHTGALNTSNSPNTVTSTLMSLVSE
MDNHMVSPTDIEEESAAFLAMIEDVEATSKRAPSKEVYKWRDTQVLRNELLPLVQQLKTH
LADNHLMTFGEQMSLAARLAAENPQVGASQRNRYQIIMLDEYQDTGHAQRVLLKSLFAGT
AVTAVGDPMQSIYGWRGATAANLERFLTDFGSNGAPATKKELTVSFRNPPEVLDLANRVS
RELLGVPEDPRRPVQPLEPGPAALNGTVRLGFFPSMDEERSYVADHLAQAYEQHDGNHPF
TAAVLVRKRKHSAAIALELQQRGVPVEIVGLAGLLGIPEVADLVAIATLLVRPYDTQAAM
RILAGPSVGLGMADLMALSDRAYNLSGRDRRATTELSRDPLERLKQIIADTIPSDQDSIV
GLAEAVADLDERLDSSDGPRYSAKGSERLRTLAARLRYLRTNSLSNSLPDLFADIERVFG
IRTEVLQREDPRSDGATGTAHLDRFAEVVQDFSRIPGANLSLLLDYLSLAESEENGLEPG
EVQVTADRVQILTVHKAKGLEWQHVAVLHADANTYVAKASTWLTNASAVPSALRGDAKGD
EDLVGAPVFEIDTPETAAELAKAGKAHIADFKQVAAEENARLFYVAITRAEQQVLVTASA
DPSKKRPVLPYEYLTMLRNDFPDSVEEWHERGEAEDYVPPTPQEAVFPPNYTVVGAEDVF
AAMQKQPDLISDDDLFERWEKEVSALIEEHEQLSAPVVAVDIGVELTATDIVNLAKNPEN
FAQRRRRPVPFKPNSYAKRGTAFHEWLENRFGAEALLDETELPGIGEELDDSDLDRLKEA
FLDSEWADRTPEHVEHPFEVSIGHHIVRGRMDAVFKNPDGRWIVVDWKTGQPPTDNHEKE
SVAMQLAVYRLAWARLQGIDVDRVDAVFHYVGRNVTYRPQQLPDGEELALKLDPSV
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgctaagccctcaagaactctcgcgcgcactgggacaaaaatttccaccaacgccgcaa
caagcagacgttattagctcaccccttgcccccacactcgtggttgctggagcaggtgca
ggaaaaacggaaacgatggctgcccgcgtggtgtggctcgtggctagtggactcgttgac
ccagatcgtgttttagggctcaccttcacgcgtaaagcagcacagcagttatccaagcga
attcgtgatcggcttgagcaattggcagggattgagaacctgcgagatctggacccgaca
ggcgcattagcaaccaaactagaagcgatcgcccccacggtatctacctacgactcctac
gcaggacgattaattagcgaatacggtctattgctaccagtggagccatcatcacgcttg
atttcgcaaacggagctattccaaattgcgcattcgatagtgtctgctcacacgggtgca
ctcaatacctcgaattcacccaataccgtgacctccacgctgatgtctttggtttcggaa
atggacaaccacatggtgtcgcccacagacattgaagaagaatcagcggcatttcttgcc
atgatcgaagacgtcgaagcaacaagtaaacgggcaccaagcaaagaggtgtacaaatgg
cgagacacacaggtgctgcgcaatgaactcctgccactagttcaacagctcaaaacacat
ctagctgacaaccacctcatgacctttggcgagcaaatgtctttagcagcccgcctcgct
gcagaaaatccacaggtgggagcgtcgcaacgcaataggtatcagatcatcatgcttgat
gaataccaagatactggccatgcgcagcgtgttttgctcaaaagcctatttgctggcacc
gcagtcaccgcagttggtgaccccatgcaatctatttacggatggcgtggtgccactgca
gccaacctcgaaaggttccttacagacttcggaagtaacggtgctcccgccaccaaaaaa
gaactcaccgtgtcgtttagaaaccctcctgaggtcctcgacttagctaaccgagtatct
cgggaactgctgggcgtacccgaagatccgcgacgaccagtgcaacctctcgagccaggc
cctgcagcattaaacggcacagtgagattgggttttttcccatcgatggatgaagagcga
tcctatgttgctgatcatttagctcaagcatatgagcaacacgatgggaatcatcccttt
actgcggctgtgcttgttcgcaaacgcaagcactcggcggcaattgctctggaattacaa
caacgcggcgtcccagtagaaattgttggactcgcaggactactcggtattccagaagtt
gcggatttagtagccattgccacattgttggtgcgtccttacgatactcaagccgctatg
cgtattttggcaggacccagcgtaggacttggtatggcggacctcatggctttgagcgat
cgcgcatacaacctcagtggccgagatcgacgtgccacaacggaattatcgcgtgacccc
ctcgaacgattaaaacagatcattgccgatacaattcccagtgaccaagattctatagtg
ggtcttgcagaagcagtggctgacctcgatgaacgcctcgacagcagcgatggtccacga
tatagcgccaaaggtagcgagcgactccgcacactagcggcacggctgcgctatctacgc
accaatagcttgagcaactcattaccggacctctttgccgatattgaacgagtattcggc
atacgcaccgaggtcctacaacgagaagatccccgtagcgatggtgcaaccggcaccgca
catctcgatcggttcgccgaggttgtccaagatttctctcgtattccaggtgccaacttg
agtttgctattggactacctttcactggcagaatccgaagaaaatggcttagaacctggc
gaagtacaagtgactgctgaccgagtacagatcctcaccgtacataaagccaaaggcctg
gaatggcaacacgttgcggttttgcatgccgacgccaacacctacgtggccaaagcatcg
acatggctcaccaatgcttctgccgtgccttcagcacttcgcggagatgccaaaggcgac
gaagacctcgtaggcgcacccgtttttgaaatcgacaccccagaaaccgcagcggaacta
gcaaaagctggaaaagcgcatattgcggactttaaacaagtagccgcagaagaaaacgcg
cgcctgttttacgtagcgatcacccgtgccgaacaacaagtacttgtcacagcttctgcg
gacccttcaaaaaaacgtccagtcctgccttacgaatacctcactatgctgcgcaacgat
ttccctgacagcgtagaagaatggcatgaacgtggtgaagcagaagactatgtgccacca
acgcctcaagaagccgtattcccgccgaactacaccgttgtcggcgcagaagacgtgttc
gccgccatgcaaaaacaaccagatctgatcagcgacgacgatctgtttgaacgatgggaa
aaagaagtaagcgctctgatcgaagaacacgagcaactttccgcacccgtcgttgcagtc
gatatcggagtagagcttacagccacagacattgtgaaccttgcaaagaaccccgagaac
tttgctcaacgcagacggcgtccagtgccatttaaaccaaactcatacgccaagcgcggt
acggccttccacgaatggctagaaaaccgctttggtgcagaagcattacttgatgaaact
gagctgccgggtatcggagaagaacttgatgactcggacctcgatagattgaaagaggcg
ttcctagacagtgagtgggcagaccgaaccccagaacatgtagagcacccctttgaagta
tcaattgggcaccacatagttcgtgggcgcatggacgcagtgtttaaaaaccccgacgga
cgatggatcgttgtggattggaaaacgggacagcccccaacagacaatcacgaaaaagaa
tcagtggccatgcagctggcagtttatcgactcgcatgggcacgactccaaggaattgat
gtggatcgagtcgacgcagtattccactatgtaggcagaaatgtgacataccggccacaa
caattgcctgatggggaagaacttgcattgaaactagacccaagcgtgtag
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