Corynebacterium diphtheriae NCTC11397: ERS451417_01239
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Entry
ERS451417_01239 CDS
T04861
Name
(GenBank) putative helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cdip
Corynebacterium diphtheriae NCTC11397
Brite
KEGG Orthology (KO) [BR:
cdip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdip03019
]
ERS451417_01239
Enzymes [BR:
cdip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ERS451417_01239
Messenger RNA biogenesis [BR:
cdip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ERS451417_01239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
MTR4-like_stalk
UCP029505
Motif
Other DBs
NCBI-ProteinID:
CKG93753
LinkDB
All DBs
Position
1:complement(1223794..1226586)
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AA seq
930 aa
AA seq
DB search
MNATVEPESHLSYFAARQKFPLDEFQIRGCQAVESGRGVLVCAPTGAGKTIVGEFAVSLA
ISQQTKCFYTTPIKALSNQKFHDLVKAHGEDKVGLLTGDVSINRDADIVVMTAEVLRNMI
YADSEALDRLSHVVMDEIHFLSDSSRGAVWEEAILGLDASVNVIGLSATVSNSEEFGRWL
NTVRGDTEIIVSENRPVPLNQWMLVARRMHPLFEPGTTGEVNSRLVEHIERLEGTTTDGT
EYGRAQLKAGGFRNRSRAMDSDNRASRRSPHRRSDKHRALSRPDVLHILQEQDMLPAITF
IFSRVGCDAALHQCMRSSLVLTTQEESEEISDIITAGVSGIPEEDLRLLDYRRWRQALMR
GFAAHHAGMLPAFRHVVEKLFTKGLVRAVFATETLALGINMPARTVVLEKLVKFNGEGHA
DLTPGQYTQLTGRAGRRGIDVIGNAVVQWAPAMDPGQVAGLASTRTYPLVSTFAPGYNMS
VNLLKTIGFEPAHRLLEKSFAQFQADGSVVDDIKAIESLEESVDQLTKQLHAAFDSHDQD
GAGDVDSFLEYIRIRRELTEEERKHKRLSIEQRDMETTRVLSKLQLGDVIAMPGKKHPLL
AVVVNPANNKKDPRVWITMETGWSGRVGTDAFAMPPVAIGHMRLSRQTIAQPRKNSRFVV
DQFRKANFQRPRRLKTSPRNRPNATISALREQLRSHPAHHWRKREDLARVGEQLVREQRM
LEAAQRKVNEATDTLGRTFDRIINLLAEYDYVEFHDGVPVITEEGENLCQIHNESDLLVA
QCLKRGIWDDLDPAELAGVVSMCTFENRRETRGEPDAATEEMAKAMNNTVRIWEELSSDE
RRYRLPITRYPEGGFALAMHQWAAGAPLGYCIAAASESGAELTPGDFVRQCRQVVDLLEQ
VRSTAYNNDTRRAARKAIDAIRRGVVAIGN
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaccgtggaaccagaatcacacttgagctattttgctgcacgccaaaaattt
ccacttgatgaatttcaaatccgagggtgccaagcggtagaaagcggccgtggtgtccta
gtttgtgcgcctacgggtgctggaaaaactattgtcggtgaatttgctgtttcccttgct
atttcgcaacaaacaaagtgtttctacaccacaccaattaaggcgcttagtaaccagaaa
tttcacgaccttgtaaaggctcatggtgaagataaagtcggcctacttactggtgatgtt
tctattaaccgcgatgccgacatcgttgtcatgactgctgaagttcttcgaaatatgatc
tatgcagattcagaggctttagatcggctgagtcacgtcgtaatggatgagattcacttt
ttatctgactcctcccgcggcgcagtttgggaagaagcaatcctcggtcttgacgcatct
gtgaacgtgatcggtttatctgcgacggtaagcaattcagaggaattcggccggtggttg
aatactgttcgcggagataccgaaattatcgtttcggaaaaccgccctgtacccctcaac
caatggatgctcgttgcccgtcgtatgcatcctttatttgagcccggcacaacaggagaa
gtcaatagtcgtctcgtcgagcacatcgagcgtctcgaaggaacgaccacagatggcact
gagtacggccgcgcccagctcaaagctggaggattccgaaatagatctcgtgcaatggac
tcagataaccgagcttcgcgacgatccccgcaccgccgttctgacaagcatcgagcctta
tcacgcccagatgtccttcatatcttgcaagaacaggacatgctaccagcgattacgttt
attttctcacgcgtcggttgtgatgctgcactccatcaatgtatgcgatcgagcctagtc
cttactactcaagaagaatcagaagaaatctccgatatcatcaccgctggcgtatcgggc
atacccgaagaggaccttcgtctacttgactatcgtcgctggcgccaagcgctaatgcgt
ggatttgctgcgcatcacgcgggtatgttgcctgcttttcgacatgtcgtggaaaaacta
tttaccaaaggactagttcgagcggttttcgctacagaaacattggcacttggtatcaac
atgccggcacgcacggttgttttagaaaaactcgtgaaattcaatggcgaagggcacgcc
gatctaacgcctggacaatatacgcagttgaccggacgcgctggccgtcgaggtatcgat
gtcattggaaacgcggtggtgcaatgggcaccggcgatggatcccggacaagttgctgga
cttgcctctactcgcacttatccactggtctctacctttgcaccgggttacaacatgtcg
gtgaacttactgaagactatcggatttgaacctgcgcatcgcttgttagaaaaatccttt
gcccaattccaagccgatggcagtgttgttgatgatattaaagcaatcgaatccttagaa
gaatccgtcgatcaattaactaaacaacttcatgctgcctttgatagtcacgatcaagac
ggtgcaggagacgtcgatagtttcttggagtacatccgcatacgtcgtgagctcaccgaa
gaagaacgcaaacataagcgattgtctattgagcaacgtgatatggaaacgacaagggtc
ttaagcaagctacagctcggtgatgtgatagcaatgcctggcaaaaagcatccgctatta
gctgtagtggttaatccagctaataataaaaaagatccacgcgtatggatcaccatggaa
acaggttggtctggacgcgtaggaacagatgcatttgcgatgcctccagttgccattggc
catatgcgtttgagcaggcaaactattgcacaaccacgtaaaaattcgcgttttgtagtt
gaccagttccgaaaagcgaatttccaacgtcctagacggctgaaaacttctccgcggaat
cgccctaatgcgacgatttcggcgctgagggaacagcttcgttcacaccccgcgcatcat
tggcgcaagagggaagatctcgctcgggtgggggagcaattggttcgagagcaacgcatg
cttgaggcagctcaacgcaaagtcaacgaggcaaccgatacgctgggtcgtactttcgat
cgaattatcaacttgcttgccgaatatgattacgtcgaattccatgacggggtacctgta
attaccgaggaaggcgaaaacctctgccagattcataacgagtctgacctattagtggca
caatgcctcaaacgaggaatctgggatgacctagatccagcagaattagctggtgtagtt
agcatgtgtacttttgaaaaccgccgagaaactcgcggagaacctgacgctgccaccgaa
gaaatggcgaaagccatgaacaacacagtgcgtatctgggaggaactcagctctgacgag
cgtcgttatcggctgcccatcactaggtatcccgaaggtggattcgcattagcgatgcat
caatgggcggcaggcgctccactcggctattgcattgctgctgcctcggaatccggagcc
gaacttacacctggagattttgttcgtcaatgccgacaagttgtcgatttgctcgaacaa
gtacgatcgactgcttacaataacgacactcggcgtgctgcgcgcaaggctatcgacgct
atccgcagaggcgtcgtggcgatcggaaactag
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