Corynebacterium diphtheriae NCTC11397: ERS451417_01488
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Entry
ERS451417_01488 CDS
T04861
Name
(GenBank) Ribonuclease j Rv2752c
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cdip
Corynebacterium diphtheriae NCTC11397
Pathway
cdip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERS451417_01488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdip03019
]
ERS451417_01488
Messenger RNA biogenesis [BR:
cdip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERS451417_01488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CKH00885
LinkDB
All DBs
Position
1:complement(1475806..1477860)
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AA seq
684 aa
AA seq
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MTEPRSRARKVTRKAGPPEAAETPVFQAPDSTATAEPADSAVKNSEKAEKDSSAESSRNN
RGRNAQRGGRNRRGNGSSNRSSQSKNNQSNNRGRRTPVKSMQGADLTQRLPEPPKAPKNG
LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVDLILPDFGPIENKLDKVD
ALVITHGHEDHIGAIPWLLKMRPDMPILASKFTMALIAAKCREHRQRPKLIEVNEKSDIN
RGPFNIRFWAVNHSIPDCLGVAIKTGAGLVIHTGDVKLDQTPPDGRPTDLPTLSRFGDEG
VDLLLCESTNATVPGFSGSEADVAPTLKRLISDAKQRVILASFASNVYRVQAAVDAAVAA
GRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDAAKMAPHKVVLITTGTQGEPMAAL
SRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVMNMLSQIGATVVTGRDAKVHTSGH
GFAGELLFLYNAARPKNVMPVHGEWRHLRANKELAISTGVEADRVVLAQNGVVVDLVDGR
ARVVGQMQVGHLYVDGVTMGDIDAEVLEERTSLGEGGLIAITAVIDSRTARLLERPTVQA
KGFSEDAVAMMPEVTELVEKTMNDLAAEGENDPYRMVQQLRRRVSRFVEQKWRRKPMIMP
TVIPTTSATIDIDDADVRASRESQ
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacctcgtagccgtgcgcgcaaggttacccgtaaagctggacctccggaagct
gcggagacgccagttttccaagcacctgattctactgcgacggctgagccggcagattct
gccgtaaagaactccgaaaaggctgaaaaagattcttctgcggagtcttcacgaaacaac
cgcggacgcaacgctcagcgcggtggtcgtaatcgtcgcggaaatggttcttctaatcgt
tcttcacaatcgaagaacaaccagtccaacaatagaggacgacgcacccctgtgaaatcg
atgcagggtgcagatcttacgcagaggctgcctgagccacctaaggctccgaagaatggt
ctgcgcatttatgccttgggtggtatttctgagattggtcgtaacatgaccgtcttcgag
tacaacaatcgtttgttgatcgttgactgtggcgttttgttcccgtcatcgggtgagccg
ggagtggacctaattcttccggactttggaccgatcgagaataagctcgacaaagttgat
gctttggtgattactcacggtcacgaagaccacatcggtgcaattccatggttgcttaag
atgcgtccggatatgccgattttggcttccaagttcactatggcattgattgctgcaaag
tgccgtgagcatcgtcagcgtccgaagctcattgaagtgaacgagaaatcggatatcaac
cgcggtccgttcaacattcgcttctgggcagtcaaccactcgattcctgattgcctcggc
gttgctattaagactggtgccggattggttattcatactggcgacgtgaagcttgatcag
accccaccagatggtcgcccaaccgacttgcctacactttctcgcttcggtgatgaggga
gtggatttgcttctttgtgagtcaaccaatgcaactgttccgggattctccggttctgaa
gcagacgtcgctccaactttgaagcgcctgatcagtgatgcaaagcaacgtgttatcttg
gcgtcattcgcatcaaacgtctatcgcgttcaggcagccgttgatgcggctgttgctgcg
ggtcgtaaggtagcgttcaatggacgctccatgattcgaaacatggaaatcgccgagaag
atgggctatttgaaagcacctcgcggcaccattgtcagcatggatgatgcagccaagatg
gcgccgcacaaggttgtactgatcacaactggtacccaaggcgaacctatggcagctttg
tcgcgtatggcacgtcgtgagcatcgacaaatcactgttcgcgatggtgatttgatcatt
ctgtcgtcttcattggttccaggtaacgaagaagcagttttcggtgtaatgaatatgctg
tcccagattggtgcgactgtggtaactggccgtgatgccaaggtccacacctcgggacac
ggattcgccggagagctgttgttcctatacaacgctgctcgtcctaagaacgtcatgccg
gttcacggcgaatggcgacacctgcgggctaacaaggaactggctatttccaccggtgta
gaagcagaccgagttgtattagctcaaaacggtgttgtagttgaccttgttgatggtcgt
gctcgtgttgttggtcagatgcaggttggacacctatatgttgatggtgtgaccatgggc
gatattgatgctgaagttttggaagaacgtacttccttgggtgaaggcggcttgatcgct
attaccgcagttattgattcgcgtactgctcgattgcttgaacgtccgacagtccaagcc
aagggattctctgaagacgcagtagcgatgatgccagaggtaactgagctggttgaaaag
acgatgaacgatctggctgcagaaggcgaaaatgatccatatcgtatggttcagcagttg
cgccgtcgtgtttcacgattcgtcgagcagaagtggcgtcgtaagccaatgattatgcca
acggtcatcccgactacatcagcgaccatcgatatcgatgacgctgatgtgcgtgcgagc
cgcgaaagtcagtag
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