KEGG   Cuniculiplasma divulgatum: CPM_0408
Entry
CPM_0408          CDS       T04682                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
cdiv  Cuniculiplasma divulgatum
Pathway
cdiv03030  DNA replication
cdiv03410  Base excision repair
cdiv03420  Nucleotide excision repair
cdiv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdiv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPM_0408
   03410 Base excision repair
    CPM_0408
   03420 Nucleotide excision repair
    CPM_0408
   03430 Mismatch repair
    CPM_0408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdiv03032]
    CPM_0408
   03400 DNA repair and recombination proteins [BR:cdiv03400]
    CPM_0408
DNA replication proteins [BR:cdiv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CPM_0408
DNA repair and recombination proteins [BR:cdiv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CPM_0408
   MMR (mismatch excision repair)
    Other MMR factors
     CPM_0408
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    CPM_0408
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9 DNA_pol3_beta_2 DUF4143
Other DBs
NCBI-ProteinID: SJK84292
UniProt: A0A1N5T2P0
LinkDB
Position
I:complement(395582..396310)
AA seq 242 aa
MKLKSSVSNLKEVTDILSSITNEAKLEFDNDGLKVRAIDSARIAMVDLFVPKESFSAYDL
EEKVEVSVELDKIRNVLRLASQSDDLLLSISGTKMKFSLGNLTKTISTLDTFVNSPKLPS
VDPKNYVVIRKADLDRGLRAATDVRDSIKFTIEDKRFEATSKSDSEEVDLIIDNDNLIEV
KAQEKASSSYPLDYLSKIIKAVSFADTLKIAFNNDYPLVMEFNFSGKDGIKTAKFLLAPR
IE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaaattaaaatctagtgtgagtaacctgaaagaagtaacagatatactaagttcaata
accaatgaagcaaaacttgagtttgataatgatggtctgaaggttagggcaatagatagc
gctaggatagccatggttgacctttttgtgcccaaggaatcgttttcagcttatgatctt
gaagaaaaagttgaggtctcagttgagcttgataagataagaaatgttctaagacttgca
tcccaatcagatgatcttctattaagtatttctggaactaaaatgaagttctctcttgga
aatcttacaaaaaccatatctacccttgacacatttgtgaattcgccaaaactgccaagt
gtggatccaaagaattatgtagttataaggaaggcagatctggataggggattgagggcg
gctactgatgtgagagattccataaagttcaccatagaggataagagatttgaagccacc
tctaaaagtgattcagaggaggttgaccttatcatagataatgataatctgatagaagtc
aaggcacaggaaaaggcttccagcagttatccgcttgattacctaagcaagataataaag
gcagttagttttgctgatacgttgaaaattgcctttaacaatgattatccccttgtgatg
gaattcaacttttcaggtaaggatggtatcaagacagctaaattcttacttgcaccgaga
atagagtag

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