KEGG   Cuniculiplasma divulgatum: CPM_0455
Entry
CPM_0455          CDS       T04682                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cdiv  Cuniculiplasma divulgatum
Pathway
cdiv03030  DNA replication
cdiv03410  Base excision repair
cdiv03420  Nucleotide excision repair
cdiv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cdiv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPM_0455
   03410 Base excision repair
    CPM_0455
   03420 Nucleotide excision repair
    CPM_0455
   03430 Mismatch repair
    CPM_0455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdiv03032]
    CPM_0455
   03400 DNA repair and recombination proteins [BR:cdiv03400]
    CPM_0455
Enzymes [BR:cdiv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CPM_0455
    6.5.1.6  DNA ligase (ATP or NAD+)
     CPM_0455
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CPM_0455
DNA replication proteins [BR:cdiv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CPM_0455
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CPM_0455
DNA repair and recombination proteins [BR:cdiv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CPM_0455
   NER (nucleotide excision repair)
    Other NER factors
     CPM_0455
   MMR (mismatch excision repair)
    Other MMR factors
     CPM_0455
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Other DBs
NCBI-ProteinID: SJK84338
UniProt: A0A1R4A5T7
LinkDB
Position
I:complement(442504..444261)
AA seq 585 aa
MLLSEFVDYLDRISGTSKRLEMNEIMKQLFLEHRDEVDILAYLIQGKVAPDYSGLEIGIS
EKTVMRVLRNLTGATENEEISLFAKTGDLGEMAEELLSRGKQTSFFNEPLTLDEFFKILL
KMTGVKGQGSSGTKEAMLTDLLIRSTKRESKYIVKIITGNLRVGVSDASIITALRLAFKP
EIEQSEVEDAFNFHPDPAYVANLLLNDRINESAGPTPFIPIKVMLAERLQSLAQIIEKLG
GIAALEYKYDGLRIQIHKRGNEIRTFSRGNEETTKQFPEIIETVRKVNADTVILDGEAVP
VNSETGEIYPFQDVSRRRGRIYDLPEVSEEIPIMVFLFDIIYLNGVPLNGKSYTERRKML
LETVGENDRLKFATQIITKSSEEAEKFFETSIESGCEGIVAKSVQENSIYRAGNRGWLWI
KFKRDYQNEISDTLDLVVIGAFYGHGRRKGSFGALLLASYNRERDMFESVCKIGSGFTDE
NLSEMKVIFSNLITDKKPSNVDSEMIPDVWIYPEKVIQIKGAEITLSPVHTCAKELVGKN
GLAIRFPRFTGTWRTDKKVEDCTSSVEIYELFKMQKKTSYKEDSN
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgttactctctgagttcgtggattatctcgacagaatatctggtacatcaaaaagactg
gaaatgaatgagattatgaaacagttattcctggaacacagagatgaagtggatattctt
gcataccttattcagggaaaggtggcaccggattactctggactcgagataggcatatca
gagaaaactgtaatgagggttctgagaaatctcaccggtgcaactgaaaatgaagaaatt
tccctgttcgcaaaaactggagaccttggtgaaatggcagaagaattactttccagggga
aagcagacctcattcttcaatgaaccactgacccttgatgaattttttaaaatccttctt
aagatgaccggcgtaaagggtcagggaagcagtggaactaaagaagccatgctgactgac
cttttgataagatctacaaagagggagtcaaagtatatagtgaagataatcacaggaaac
ctcagagttggggtttcagatgcatcaataattactgcactccgactggcatttaaacca
gaaatagaacaatctgaggtggaggatgctttcaattttcatcctgatcctgcttacgtt
gctaatcttttgctcaatgatagaataaatgaaagtgcaggacctacaccattcatacca
ataaaagtaatgcttgctgagaggcttcagtctcttgctcagataattgaaaaacttggc
ggaatagcagctttagaatacaagtatgatggcttaaggatacagatacacaagcgtgga
aatgaaataaggacattttcaaggggaaatgaagaaacgacaaaacagtttcctgaaatt
attgaaactgtcagaaaggtaaatgctgatactgtgatccttgacggagaggcagtacct
gttaacagtgaaacaggagagatttatccttttcaggatgtttcaaggagaagaggaaga
atatacgatctgccggaggtttcggaagagatacccattatggtttttctctttgacatt
atctatcttaatggtgtcccccttaatgggaaatcatatactgaaagaaggaaaatgtta
ctcgaaactgtgggtgaaaatgatcgcttgaaatttgcaacacagataataactaagagt
tcagaggaagcagaaaaattctttgaaacttccatagaatcaggatgtgagggaatagtt
gcaaagagtgtgcaggagaattctatttacagggctggaaacaggggatggttgtggata
aaatttaagagagattatcagaatgaaatctcggatacactggatctggtagtaataggt
gcattctacggacatggacgcagaaaaggtagcttcggtgcacttcttttggcttcttat
aatagggaacgtgatatgtttgaatcagtatgtaagattgggtctggattcactgatgaa
aatctttctgaaatgaaggtgatattctcaaatctcatcacagataaaaagccatcaaat
gttgattcagaaatgataccagatgtctggatataccctgaaaaggtgattcagattaag
ggagctgaaataacattgagccctgttcatacatgtgcaaaggaattagttggtaaaaat
ggccttgccataagatttccaagatttactggtacctggagaactgataaaaaagtagag
gactgtacatcctctgtagaaatttatgaattatttaaaatgcagaaaaaaactagttat
aaggaagatagtaattaa

DBGET integrated database retrieval system