Cuniculiplasma divulgatum: CPM_0775
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Entry
CPM_0775 CDS
T04682
Name
(GenBank) UvrD helicase/Cas4 nuclease
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cdiv
Cuniculiplasma divulgatum
Pathway
cdiv03420
Nucleotide excision repair
cdiv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cdiv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CPM_0775
03430 Mismatch repair
CPM_0775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdiv03400
]
CPM_0775
Enzymes [BR:
cdiv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CPM_0775
DNA repair and recombination proteins [BR:
cdiv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPM_0775
MMR (mismatch excision repair)
Other MMR factors
CPM_0775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_11
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
SJK84623
UniProt:
A0A1R4A6M8
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All DBs
Position
I:complement(742830..745526)
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AA seq
898 aa
AA seq
DB search
MMSKSRILVSANPGSGKTEDLSNQVSKLLQDGVDSDNILCLTFTNKARDEMERRIILKIK
DTKYKVPDIHTFHSLSQSIINHRMEGGDLIPERFLRYQILKSLETRQIMNYDGEVLSKDY
PAIVNVGQIVNAIKFLKSFAILPDKVHIEELKKNVRMEYNNGNGVNGYTLEEMEILCEGF
LDIFRDYESSKNLSQMDYNDILLRAVNYSKAHFNKYQYVFVDEVQDMSEIEYELVKQVGE
NVYAVGDMKQAIFGFQGGNIRALRDMMSGKDFEKRVIDGTRRLPKNVVEYCINFYRTHEP
EELSPELDHFRSMNEKDGVVTLIRLKDKGDMIDAVTEILNKQNNDESVGIIVRTNEQAND
LSDSLTLKNISHQKISGTKGEKLWREEISKFIGGIYGTSDSIIGMIYSIYSRIPLYDGIQ
IAERMRFENDLKKVLPRELIDIREKYGNHKNQLLQLFNDYIIPNSIALGESAFEAAKDVF
DSLPMFLDRFGTGEEYSLASLQKYILQENSRDSVDEISEKVCIITVHKAKGLEFDHVIYI
PKYTEKKNISAIDLIVDSILKSNNLSYSRDERIKEENRIDFVALTRTKNSLDIITEKKSS
TRYDLEPCKKIDFTTKIVNNEFVSMKDISDREKLKLNFKPWIRDYLKKKMEKLNNLSFTM
LERVKELDKFVESYVLGIQTKSSALTFGSDIHSYIENYIKSHETPPIMNDEKLTRTWSNF
ISYDKYVREIQKGKWLGSEMKFKQKVSNVFPDIMTNITVEGRIDGLYKYIEGNTEKTVIV
DFKTSKKVNRDYVNQLSLYAKLFSLENKIDMEQIESEIAYLSLRDTKVNINRIEKRWDRI
DPTIEMRALEDVKKTVEKFVNYKLSVDSMIRDILSVRNTESNVFIEFQKMLKMEMENS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaaatcacggatacttgtttctgcaaatcctgggtctggtaagactgaggat
ctttcaaatcaggtttcaaaacttcttcaagatggagtagattcagataatattttatgc
ctcacgttcacaaataaggcaagagatgagatggaaagaaggataatacttaagattaag
gatacaaaatataaggtgccggacattcatacgttccatagcctatctcaaagtataata
aatcatagaatggaaggtggggacttgatacctgaaagattcctcagatatcagatatta
aaatctcttgaaacaagacagataatgaattatgatggagaagttttatcgaaagattat
ccggctatagtaaacgtaggtcaaattgtgaatgcgataaagttcctcaaaagttttgcc
attttaccagataaagtccatatagaggaacttaagaaaaatgtaaggatggagtataac
aatggtaatggagtgaatggttacactctggaagaaatggaaatcttatgtgagggattt
ctagatatattccgtgactacgaatcttcaaagaatttatctcagatggattataacgat
attctcttaagagctgtaaattattccaaggcccacttcaataaatatcagtatgttttt
gttgacgaagttcaggatatgagtgaaatagaatatgaactggtaaagcaggttggggag
aatgtgtatgctgttggagacatgaaacaggcaattttcggtttccagggtggtaacatt
cgtgctttaagagatatgatgtccgggaaagattttgaaaaaagggtcatagatggaacc
agaagattgccaaaaaatgttgttgaatattgcattaacttctacagaactcacgaacca
gaagaactgtcacctgagctggaccatttcaggagcatgaatgaaaaggatggggtggta
acacttatcaggctgaaagataagggtgatatgatagatgcagtaacagaaattctgaat
aagcagaataatgatgaatccgtaggtattattgttagaactaatgaacaggcaaatgat
ctttcagattctctcacattaaagaatatttcacatcaaaagatttctggtacgaaaggt
gagaagctgtggagagaggaaatttcaaaattcatcggtgggatttacggaacctctgac
agcataattggaatgatctattcaatttactccaggataccattatacgatggtattcag
atagcagagagaatgagatttgaaaacgatctgaagaaggttcttcccagagagttgata
gatataagggaaaaatatggaaatcataagaatcaacttcttcagctattcaatgattat
ataattccaaattctattgctctgggcgaatcagcctttgaggctgccaaggatgtattt
gactctcttcccatgttccttgatagattcggaacaggagaagaatactccctcgccagt
ctccagaagtatatacttcaggagaattcaagggatagtgttgatgagatctcagagaag
gtctgtataattactgtacataaggcaaaggggcttgaatttgatcacgttatatacatt
ccaaaatacacagagaagaagaatataagtgccattgatcttatcgtagattccatactg
aaaagcaataatctgagttacagtagggatgaaagaataaaggaggaaaacaggatagat
tttgttgcacttactagaacaaagaattctcttgatattataactgagaaaaaatcttca
acgagatatgatttagaaccatgcaaaaaaattgactttacaactaagatagtaaataat
gaatttgtaagtatgaaggatatttccgatagagaaaaattgaagcttaatttcaaacca
tggataagggattatttgaaaaagaaaatggaaaaattgaataacctgagttttaccatg
ctcgagagggtcaaggaactggataaatttgttgagtcatatgtgctaggaatacagact
aaatcttcagccttaacctttggaagtgatattcacagctacatagaaaattatataaaa
agtcatgagacaccaccaattatgaatgacgaaaagcttaccagaacgtggagcaatttc
atttcctatgataaatacgtaagggaaatacagaagggtaaatggttaggatctgaaatg
aaattcaagcaaaaggttagtaacgttttcccggatattatgacaaatattactgttgag
ggcaggatcgatggattgtataagtacattgaaggaaatacagagaaaacagttattgtg
gactttaaaacttccaaaaaagttaacagggactatgtgaaccagctatcactttacgca
aagctattttctcttgaaaataaaatagatatggaacagatagagtcagaaattgcatat
ttgagtctgagagataccaaggtgaatataaacaggatagaaaaaagatgggatagaatc
gatccaaccattgagatgagagcattagaagatgtaaagaagaccgttgaaaaatttgtt
aattataaattgtcggtcgattcaatgattcgagacatccttagtgtaaggaacaccgaa
tctaatgttttcattgaatttcagaagatgctaaagatggaaatggaaaacagttga
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