KEGG   Cuniculiplasma divulgatum: CPM_0868
Entry
CPM_0868          CDS       T04682                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
cdiv  Cuniculiplasma divulgatum
Pathway
cdiv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cdiv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CPM_0868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdiv03021]
    CPM_0868
Transcription machinery [BR:cdiv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     CPM_0868
 Prokaryotic type
  Archaeal type
    TFB
     CPM_0868
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Cyclin_C UPF0253 Cyclin_N RB_B Zn_ribbon_LysW Trm112p Zn_Ribbon_Prim Sigma70_r4 BRF2-like_C_cyclin_rpt Zn_ribbon_tTFIIB Zn_ribbon_PaaD Zn_ribbon_IS1595 Zn_ribbon_8 TackOD1 HTH_AsnC-type Lar_restr_allev Cas12f1-like_TNB Zn_ribbon_Elf1 At4g08330 HTH_Tnp_ISL3 GATA Zn_ribbon_ACC Zn_ribbon_RRN7 DUF7573
Other DBs
NCBI-ProteinID: SJK84715
UniProt: A0A1N5UAZ4
LinkDB
Position
I:838256..839188
AA seq 310 aa
MEKEKRKIEQIEKCPECGSTDLSRDYERGELVCNKCGIVIDESYIDQGPEWRAFDTEQNE
SRARAGSPMTFTLHDKGLSTDISWKNKDSYGKSIPTRNRAQLYRLRKWQKRIKVSNAAER
NLSQALQEMERMASNLSIPNDVRETAAVIYRKAVKQNMIRGRSIEGVVAGSLYAACRITN
VPRTLDEIASITRVKKKEIGRTYRIMSRYLQLNIMPSKPEDYLNRFCSKLKLSLDTRKQA
AEIIKLAQDNDLTSGKGPTGVAAAAIYIASILMNERRTQRSVAEVAGVTEVTIRNRYKEL
TEKLNLEVQE
NT seq 933 nt   +upstreamnt  +downstreamnt
atggaaaaagaaaaaagaaaaattgagcagatagaaaagtgtccggaatgtggttcaact
gatctttccagggattacgaaaggggcgaactggtgtgcaataaatgtggtattgtcatt
gacgaaagttatattgatcagggaccagaatggagggcattcgacacagagcagaatgaa
tccagagcaagggctggttccccaatgacttttacattgcacgacaagggtttatccaca
gatatatcatggaagaataaggattcttacggtaaatccataccaaccagaaatagggcg
caattatacagactgagaaaatggcagaagaggataaaggtatcaaatgcggcagagaga
aacctttcacaggcattgcaggaaatggaaagaatggcatctaatctcagtattccaaat
gatgttagagaaactgcagctgttatttacagaaaggcagtcaaacagaacatgatcagg
ggtaggagtattgaaggggttgtagccggctctctatacgctgcgtgcagaatcacaaat
gtgccaagaaccttggacgaaatcgcatctataacaagggttaagaaaaaggaaattggt
cgaacataccgtattatgagcagatatctacagcttaacataatgccatcaaagcctgaa
gactacctgaacagattctgcagtaaacttaagctctccctggatacaagaaaacaggca
gctgaaataattaaacttgcacaggataatgaccttacatcaggaaaaggtccaactgga
gtggccgctgcagccatatacattgcatcgattcttatgaatgaaaggagaacccaaaga
tctgtagctgaagttgcaggagtaaccgaagtgacaatcagaaacaggtataaggagcta
acagagaagcttaaccttgaggttcaggaataa

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