Cuniculiplasma divulgatum: CPM_1349
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Entry
CPM_1349 CDS
T04682
Name
(GenBank) exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
cdiv
Cuniculiplasma divulgatum
Pathway
cdiv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdiv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPM_1349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdiv03019
]
CPM_1349
Messenger RNA biogenesis [BR:
cdiv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CPM_1349
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CPM_1349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
HSD_C
Zn_ribbon_NOB1
DUF3297
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-ProteinID:
SJK85149
UniProt:
A0A1N5VE77
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All DBs
Position
I:1311704..1312291
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AA seq
195 aa
AA seq
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MIGMGEEKTTYVIPGDVLAYSEEYLPGKNTLEENSRIISATSGEVKKNDKELVASVDNGI
KRILPRIEDIVYGKIMKNDSRQVSIQIVGIEQNGILENYMADGYIRNMQDYKKEDRRAQT
VHIGDLIRGKVIRVGQNLEITLNGNRLGVLKSRCSRCREVLVLKNGVLFCENCNRSEMRK
IAPDYGSPEFGEMKK
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgattggtatgggagaagaaaagactacttatgttattcctggagatgttctggcctat
tcagaagaatatttacctggaaaaaacacacttgaggaaaactcaagaataatttctgct
acctctggagaagttaagaagaatgataaagagcttgttgccagcgtagataatggaata
aagagaattctaccgaggattgaagatattgtctatggtaaaataatgaaaaatgattca
agacaggtttcaatccagattgtgggaatagaacaaaatggaatacttgaaaattatatg
gcagacggatacatcagaaacatgcaggactacaaaaaggaagatagaagagctcagacc
gttcatataggagatctaataagaggaaaagtgatcagggtaggtcaaaacctagaaata
accctaaatggaaacagacttggtgttcttaaatctagatgctcgagatgcagagaagtg
cttgtacttaaaaacggcgttcttttctgtgaaaactgcaacaggagcgaaatgcgaaaa
atagctcctgattatggatcgcctgaatttggggagatgaaaaaatga
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