Celerinatantimonas diazotrophica: CEDIAZO_00756
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Entry
CEDIAZO_00756 CDS
T07531
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cdiz
Celerinatantimonas diazotrophica
Brite
KEGG Orthology (KO) [BR:
cdiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdiz03021
]
CEDIAZO_00756 (rapA)
Transcription machinery [BR:
cdiz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CEDIAZO_00756 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Cas3-like_C_2
NEMO
Motif
Other DBs
NCBI-ProteinID:
CAG9295636
LinkDB
All DBs
Position
CEDIAZO_genome:complement(793763..796669)
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AA seq
968 aa
AA seq
DB search
MVFSLGQRWISDSESELGLGTVVGVEGRMITVLFPATGESRLYAKEDAPITRVVFNLGDE
ITHVDGWHLSITNVIEQDGLLVYQGTRHDNDQEDEIKEVFLSHFLKFNKPQDRLFAGQID
RFDRFVIRHNALLQRYSNQRSPLRGLLGGKVSLIAHQLYIAKEVGRRFAPRVMLADEVGL
GKTIEAGLIIHQQLTAGLAQRILIVVPETLQHQWLVEMLRRFNLSFSLFDEQRCVEAYAD
SDNPFDTAQLVLVSMDMLKAKKRRFEQICEAQWDLMVVDEAHHLEWHAEQPNRQFQIVEA
LSDEIPGLLLLTATPDQLGHFSHFARLRLLDSARFHDYDAFLEEEKHYHQLAEIAEPLMS
DAAISAQHLDNLTSLSGISLTASLEQINHSQNDIRQSARHKLFNELLDCHGTGRVMFRNT
RSAVDGFKQRRLQAHPLKLPSQYQTALRVHNMMSAQQSHESRAEQLLYPESLYQALEGEG
IQWTHYDPRVQWLIDFLLANKREKVLVICASAQTALAIEEAARTEEGIRGTVFHEEMSIL
ERDKAGAYFAQEEAGAQVMVCSEIGSEGRNFQFARHLVLFDLPTNPDLLEQRIGRLDRIG
QQHDIAIHVPFMQDTAQDKLLQWYHHGLNAFEQPCATGSALYQKYAPHLMEVLATGQSDK
LETLIEQTHQDHLALLAQMEAGRDRLLEMHSNGGEQAHQLVTEISEHENHPEFINQTLRL
FDVLGVQQDDLGEQIMLFKPTEHMLVASLPGLAAEGQLVTFDRDSSLHRDEVALLNEEHP
LFEAALDAILSSETGSTSVALLKNNALPAGNFFLECLFVVETSAPPQYQVSQYLPATPIR
ILLDKNGNDLSAKVGFETFNKQLSAVNRHIGSKLVNASQTQIHELLRQAQQRVKPQVETL
VKHAAMRAKTQLGDELSRMQALKQRNPAIRDDELEFWQTQQQEVLNYLDKAQLKLDALRF
IVIAPSKS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggttttttccctcggtcaacgttggattagtgattccgaatcagagttaggtctaggt
acagttgttggtgttgaaggccgcatgattacagtgttgtttccggcaacgggtgagagc
cgactttatgcaaaagaagatgcccctattacacgcgttgtttttaatctcggtgatgaa
atcacccatgttgatggctggcatttgagcatcacgaatgtcattgagcaagatggctta
ctcgtctatcaaggaacacgccatgacaatgaccaagaagatgaaataaaggaagtcttt
ttaagtcatttcttaaaatttaataaaccgcaggaccgactgtttgccggacagattgat
cgctttgatcgctttgtgattcgtcataatgccctattacaacgatattcaaaccaacga
tctcctcttcgaggattacttgggggtaaagtcagcttaattgcgcatcaattatacatt
gccaaggaggtcggtcgacgctttgctcctcgggtcatgcttgccgacgaagtcggatta
ggtaagaccattgaagcgggattaatcatccaccagcaactaaccgcaggacttgcccag
cgtattttgattgtggtccccgaaactctccagcaccaatggttagtcgaaatgctgcgc
cgttttaatttatcatttagtctattcgatgagcagcgttgtgttgaagcctatgcggat
tcggataacccatttgacaccgctcagttggtattagtaagcatggatatgctgaaggcg
aaaaaacgccgctttgagcagatttgcgaagcacaatgggatttaatggttgttgacgaa
gcgcaccaccttgaatggcatgcggaacaaccaaaccgacagttccagattgtggaagcc
ctcagcgatgaaattcccggtctattactattaacggcaacccctgaccaactcggccac
tttagccattttgctcgtctgcgactcctcgacagtgcccgttttcatgactatgacgct
ttcttagaagaagagaagcattatcaccaattagccgaaattgctgaaccactgatgagt
gacgcagcgattagtgcacagcatttggataatctaacatctttaagtggcatctcttta
accgcttctcttgaacagattaaccattcacaaaacgatattcgtcaatcagctcgccat
aaattgtttaatgaacttttagattgtcatggaaccggtcgagttatgttccgtaatact
cgttcagcggtggatggttttaaacagcgccggttgcaagcccatccgttaaaactccct
agtcaataccagaccgctttacgagtacataatatgatgagtgctcaacaaagccatgaa
agccgagccgagcagttactgtatccggaatcactctaccaagctctcgagggagaagga
attcagtggactcactatgaccctcgagtacagtggctcattgattttctactcgcaaat
aaacgcgaaaaagtgttagtgatctgtgccagtgcacaaacggccttggctatcgaggaa
gcggcccgaaccgaagaagggattcgtggtacggttttccatgaagaaatgagtattctc
gagcgtgacaaagcaggcgcttattttgcccaagaagaagccggtgcccaggtcatggta
tgctcagaaattggttctgaagggcgcaacttccaatttgcgcgtcatctggtgttattt
gatttaccaactaatccggatttacttgagcaacggattggtcgactggatcgaatcggg
caacaacatgatatcgccattcatgtcccatttatgcaagacacagctcaggataaactg
ttgcaatggtaccatcatggacttaatgcgttcgaacaaccgtgtgctacaggcagtgcc
ttatatcaaaaatatgcgccacatttaatggaagttctagctaccgggcaaagtgataaa
ttagagaccctgattgaacaaactcatcaagatcatctggcgctgctagctcagatggaa
gctggccgagaccgcttactcgaaatgcattccaacggtggcgagcaagcccatcaactt
gttactgaaattagcgaacacgaaaaccacccagaatttatcaaccaaacgttacgtctc
tttgatgttctgggagttcagcaggatgatttaggcgaacagattatgctgtttaaaccg
accgaacatatgctcgttgcttcactgccaggattagcagccgaagggcaattagtaaca
tttgatcgggacagttctctgcatcgggatgaagttgcgctgctcaatgaagaacacccg
cttttcgaagcagcattggatgccattttatcttccgaaacaggttcaacatcagttgct
ctactaaaaaataatgctcttccagcagggaatttctttttagagtgtttgtttgtcgtt
gaaacttccgcaccaccacagtatcaggttagccaatacctcccagcaacaccaatccgt
atactactggataaaaatggtaatgatctttcggccaaagtaggcttcgaaacgtttaac
aaacagctcagtgcagttaaccgtcacattggtagtaaattagtgaatgcctcacaaact
cagatccatgaattgctacggcaagcccaacagcgggtaaaaccgcaggtcgaaacgtta
gttaagcacgcggcaatgcgagccaaaactcaattaggcgatgaattaagccgcatgcag
gcactgaaacaacgtaacccagctattcgcgatgatgaactggagttctggcagacgcaa
caacaggaagtgctaaattatctggataaagctcaacttaaactcgatgcactgcgcttt
attgtgattgcaccttcaaaatcttaa
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