Celerinatantimonas diazotrophica: CEDIAZO_02446
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Entry
CEDIAZO_02446 CDS
T07531
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cdiz
Celerinatantimonas diazotrophica
Pathway
cdiz03030
DNA replication
cdiz03430
Mismatch repair
cdiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEDIAZO_02446 (holA)
03430 Mismatch repair
CEDIAZO_02446 (holA)
03440 Homologous recombination
CEDIAZO_02446 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdiz03032
]
CEDIAZO_02446 (holA)
03400 DNA repair and recombination proteins [BR:
cdiz03400
]
CEDIAZO_02446 (holA)
Enzymes [BR:
cdiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEDIAZO_02446 (holA)
DNA replication proteins [BR:
cdiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEDIAZO_02446 (holA)
DNA repair and recombination proteins [BR:
cdiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEDIAZO_02446 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CAG9297270
LinkDB
All DBs
Position
CEDIAZO_genome:2596568..2597575
Genome browser
AA seq
335 aa
AA seq
DB search
MKVYPEQLAGQLKQVVPAYLVCGDDSLLSQEAAQTIRQHVLAAGNVERLSFLYDSDFQWE
HIFSQVQELSLFSPLKLLEIHFEKSLDKTAQQQLNELSNILHQDICLLLMTPALKKNQLQ
QNWARWVDQYGLIVQTNTPQGQQLKRWIKNRLDGYQLCPCNELSELLFSYYEGNLLALNQ
VIEQLHLVYPDGQTSVEQVEQTLINSGQFTQYQLVDTLLMGDINRAEQIARQINQQGDEL
TLFNWLLDKDLQAIEKIKQGHPAALIFKHYKIWNKRQPLLLKAAQNLNISQIQSARWQLA
TLDKAIKDVHHSDSWNQFVALLLIFLSPTWSPRSA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctatccggaacaattagccggacaactcaaacaagttgttccggcttattta
gtttgtggtgacgatagtttgttatcacaagaagcagcgcaaacgatccgtcaacacgta
ctcgcagctggaaatgtcgaacggttatcgtttctttatgacagcgattttcaatgggaa
catatttttagtcaggttcaagaactttcgttgtttagcccacttaaactattagaaatc
cattttgaaaagagcttagacaaaacagcccaacagcagttaaatgaattaagcaacatc
cttcatcaggatatctgtctattactgatgacccctgcacttaagaaaaatcagctccaa
caaaactgggctcgttgggtagatcaatacggtttaattgttcaaactaataccccccaa
ggccaacagcttaaacgttggattaagaaccgtttagatggctatcaactttgcccctgt
aacgaacttagcgaattattattcagttactacgaaggtaatctgctggctctcaatcag
gtgattgagcaacttcatttggtttatccggatggtcagactagtgttgagcaggttgaa
cagacgctcattaactcaggtcaatttacccaatatcaactagtcgatactttgctgatg
ggagatattaaccgtgctgaacaaattgctcgacaaatcaatcagcaaggtgatgaactc
actttatttaattggttgctcgataaagacctgcaggcgattgaaaaaatcaagcaaggc
catccagctgccctcattttcaaacactataaaatttggaataaacgccagcctctgctt
ttaaaagcagcgcaaaacttgaatatcagtcaaattcaatctgcgcgatggcagcttgcc
acgcttgataaagccattaaagacgtccatcacagcgatagttggaatcaatttgtagca
ttgttacttatttttctatctcccacttggagccctcgtagtgcctaa
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