Celerinatantimonas diazotrophica: CEDIAZO_02511
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Entry
CEDIAZO_02511 CDS
T07531
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cdiz
Celerinatantimonas diazotrophica
Pathway
cdiz03410
Base excision repair
cdiz03430
Mismatch repair
cdiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEDIAZO_02511 (recJ)
03430 Mismatch repair
CEDIAZO_02511 (recJ)
03440 Homologous recombination
CEDIAZO_02511 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdiz03400
]
CEDIAZO_02511 (recJ)
DNA repair and recombination proteins [BR:
cdiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CEDIAZO_02511 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CEDIAZO_02511 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CEDIAZO_02511 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
UBA_NBR1_C
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CAG9297335
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Position
CEDIAZO_genome:complement(2662941..2664707)
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AA seq
588 aa
AA seq
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MTTQNTPVMNHVKLVRRPTVAATELGKLPQEIPQIIRQIYLSRGVSVSDELERNLRALLP
WQHLNGLDSAVALLLAYQQRRIIIVGDFDCDGATSTALMLRGLKSMGFTQVDFLVPNRFE
YGYGLSPEIVKLAQERQGELIVTVDNGISSISGVAAAGDAGIPVIVTDHHLPGHELPDAA
AIVNPNLAECDFPSKNLAGVGVAFYLLCALRAKLRENGFFANYPEPNLAHYLDLVALGTV
ADVVVLDHNNRVLVHQGLSRIRAGRCCAGIQALIEISGKNQSSLTASDLGFALGPRLNAV
GRLDDMSLGIQCLVSDDLFQARPMASTMDELNRERKAIELSMQQEAEQSVAKLSFEHQTL
PNALALYQSDWHQGVVGLVASRIKEKYYRPVFAFADSDEQTIKGSGRSISGVHMRDLLER
IDTLNPGLIDKFGGHAMAAGLSLAKANFPIFAEQLEKVASEWIQPAQLTGSLLSDGELSG
DLLSLEFAQLLQKSGPWGQGFSEPLFDGLFWLLDQRIVGQNHLKMTVQPVAGGPTLDAIA
FHIDRNCWPDQSVRQVQLAYKLDINEFRGRRSVQLLVQLLNKQDIKSE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcaaaatacgcccgttatgaatcatgtgaaattagttcgtcgtccaactgtt
gcggcgactgaattaggcaagctccctcaggaaataccacaaatcattcgtcaaatttat
ttaagccgaggagtgagcgttagtgatgaactggagcgtaatttaagagcattactccct
tggcagcatcttaatggtttagattctgctgtggcgttattactcgcttatcagcaacgc
cggattattattgtcggggattttgattgtgatggcgcgaccagtactgccctgatgttg
cgcgggctcaagtctatgggctttactcaagtcgattttttggtgccaaatcggttcgaa
tatggttacggtttaagtcctgaaattgtcaagttggctcaagagcgtcagggggaatta
attgttactgttgataatggcatctcttctatcagtggtgtggcagccgctggagatgcg
ggtatcccggttattgtgacggatcaccatttacctgggcatgaactacctgatgcggct
gcaattgtgaatccaaatttagcagagtgtgacttccctagtaaaaatttagctggtgtt
ggtgttgcgttttatctgttatgcgcgctacgagcaaaattgcgtgaaaatggtttcttt
gctaattatcctgaacctaatctggcgcattatcttgatttagtagcgttgggtacggtg
gctgatgtggtggtacttgatcacaacaacagagtattagttcatcaaggcttatcacgc
attcgtgctggacgatgctgtgctgggattcaagcgttgatcgaaatctcgggtaaaaat
cagtcatcactgacagccagtgatcttggctttgcgttggggccgcgtttgaacgcggtt
gggcgcttggatgatatgagcctagggatccagtgtttagtcagtgatgacctgtttcag
gcccgaccaatggcctcgacgatggacgagctcaatcgtgaacgaaaagcaatcgagcta
agcatgcagcaagaagctgagcaaagtgtggctaaactctcttttgaacaccaaaccctg
cctaacgcattggctctttatcaaagcgactggcatcagggtgtcgtcggacttgttgcg
tcacgaattaaagaaaaatattatcgccctgtattcgcttttgccgatagtgatgaacaa
acgattaaaggctcgggacgttcgatcagtggtgtacatatgcgagatttactggagcgc
atcgataccctaaatcccggattaattgataaatttggaggccatgcaatggccgcgggg
ctctctttggcaaaagctaattttccgatttttgcagagcagttagaaaaagttgccagc
gagtggattcagccggcacagttgacaggatcattactctctgatggtgaactctcaggc
gatttattgtcgctagaatttgcgcagttattacaaaaatcgggaccgtgggggcagggg
tttagtgagcctttgtttgatggtttattttggttattagatcagcgtattgtggggcaa
aaccatctaaaaatgacagtgcaacctgttgctggtgggccaacattagatgcgattgca
tttcacattgatcggaattgctggcctgatcaaagcgttcgccaggtgcaactggcttat
aaattggatatcaacgagtttcgtggccgtcggagtgtgcagcttttggttcagttgtta
aacaaacaggatatcaagagtgaataa
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