Celerinatantimonas diazotrophica: CEDIAZO_02674
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Entry
CEDIAZO_02674 CDS
T07531
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cdiz
Celerinatantimonas diazotrophica
Pathway
cdiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEDIAZO_02674 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdiz03019
]
CEDIAZO_02674 (pnp)
03016 Transfer RNA biogenesis [BR:
cdiz03016
]
CEDIAZO_02674 (pnp)
Enzymes [BR:
cdiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CEDIAZO_02674 (pnp)
Messenger RNA biogenesis [BR:
cdiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEDIAZO_02674 (pnp)
Transfer RNA biogenesis [BR:
cdiz03016
]
Prokaryotic type
tRNA degradation factors
CEDIAZO_02674 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
KH_2
S1_2
S1_RRP5
KH-I_KHDC4-BBP
aRib
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
CAG9297489
LinkDB
All DBs
Position
CEDIAZO_genome:complement(2851896..2854040)
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AA seq
714 aa
AA seq
DB search
MNPIVKKFQYGQHSVTLETGAIARQADAAVMVTVDDTAVFVTVVGKKEAKPGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVVATVMSVN
PQIQPDIPALIGASAALSLSGIPFHGPIGAARVGFINGNYILNPMVDELPESKLDLVVAG
TEKAVLMVESEAQELPEDVMLGAVMYGHEQMQVVIEAINEFAKEAGKPAWDWQAPAKNEA
LSSKVKELAEQKLGEAYRITEKAARYDAVDAIKKEVTDQLIAENEELDPMEIGDELVKIE
KAVVRSRILAGEPRIDGREPDMVRALDVATGVLPRTHGSAIFTRGETQALVSCTLGTQRD
AQMIDELTGTRTDHFLLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGIAAVMPDESEF
PYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKSSVAGIAMGLVKEGDQFVVLSDI
LGDEDHLGDMDFKVAGTENGVNALQMDIKIEGITKEIMQIALNQAKGARMHILGVMNEAI
GGARQDISEFAPRIHTMKISPEKIKDVIGKGGATIRALTEETGTTIEIEDDGTVKIAATD
GDQAKYAIARIEQLTAEVEVGQIYQGKVVRLADFGAFVQILPGKDGLVHISQIAFERVNK
VSDYLKVGDEVKVKVLEVDRQGRVRLSMKEAMPKPEPKTEEPAEDAKADSTDNQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgttaaaaaattccaatatggccagcatagtgtcacgctggaaacgggc
gccattgctcgtcaggctgatgcagcggtcatggtgaccgttgatgacacagcggtcttt
gttactgttgttggcaaaaaagaagcaaaaccaggacaagacttcttcccgctgacagtt
aattatcaagaacggacatatgcagctggtcgtattccaggtggtttctttaaacgtgaa
ggtcgtccatctgaaggtgagactctgattgcgcgtttgatagaccgtcctattcgtccg
ttattccctgaagggtttgttaatgaagtgcaggtcgttgcaactgtaatgtctgtcaac
cctcagattcagcctgatatccctgctctgattggtgcttcagcagcattgtctttgtca
ggtattcctttccatggtccaattggcgctgctcgtgttggctttatcaatggtaattat
atccttaacccaatggttgatgaattacctgaaagcaaactagatctcgttgtcgctggg
actgaaaaagctgtattgatggttgagtccgaagctcaagagctgcctgaagacgttatg
ctgggggctgtcatgtacggtcacgagcaaatgcaagtggtaattgaagcgatcaacgaa
ttcgcgaaagaagctggcaaacccgcttgggattggcaagcacctgcgaaaaatgaagct
ctgagcagtaaagtgaaagagttagctgagcagaagttgggcgaagcgtaccgaattact
gaaaaagcagctcgttacgatgctgttgatgcaattaaaaaagaagttacagatcagctg
attgcagaaaatgaagagttagatccgatggaaatcggtgatgagctggttaaaattgag
aaagctgttgtacgaagtcgtattctggctggtgaaccacgtattgatggtcgtgaacct
gatatggtgcgggcattggatgtggcaactggtgttctgccgcgtacccatggtagtgct
attttcacccgtggtgaaactcaggcattggtttcttgtacattggggactcagcgcgat
gcacaaatgattgatgagctaactggaacgcgcactgatcacttcttattgcattacaat
ttccctccatattgtgtgggtgaaactggcatgatggggtctcctaagcgccgtgagatc
ggccatggtcgtttggcaaaacgtggtattgctgcggttatgcctgatgagagtgaattc
ccatacacagttcgtgtggtatcagaaatcactgaatcaaatgggtctagttcaatggcg
tctgtttgtggctcttcgctagcactgatggatgcaggggttccgattaagtcatcggtt
gcagggattgcaatgggcttggttaaagaaggcgatcagttcgtcgtcctgtctgatatc
ctcggcgatgaagatcaccttggtgatatggactttaaagtagccggtaccgaaaatggt
gtaaacgcgctgcagatggacataaaaatcgaagggatcacgaaagagatcatgcagatt
gctttgaatcaggccaaaggtgcacgtatgcatatcttgggcgtgatgaatgaagcaatc
ggtggtgcacgtcaagatatctctgaatttgcgccacgcatccataccatgaagattagt
ccagaaaaaattaaagacgtgatcggtaaaggtggtgcgaccatccgtgcgctgaccgaa
gaaacaggaactaccatcgagattgaagatgacggtactgttaaaatcgcagcaactgat
ggcgatcaggcaaaatatgcaattgcgcgaattgaacagttaacggctgaagtagaagtt
ggacaaatttaccaaggtaaggttgttcgtttggccgatttcggtgcttttgttcagatc
ctgccaggtaaagatggtttggttcatatttcacaaattgcctttgagcgagtcaacaaa
gtgtctgactacttgaaagtcggtgatgaagtgaaagtgaaagtacttgaagtagaccgt
caaggacgtgttcgcttaagtatgaaagaagctatgcctaaaccagagccaaaaactgaa
gaaccagcagaagatgccaaagcagattcaaccgataaccagtaa
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