Celerinatantimonas diazotrophica: CEDIAZO_02677
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Entry
CEDIAZO_02677 CDS
T07531
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cdiz
Celerinatantimonas diazotrophica
Brite
KEGG Orthology (KO) [BR:
cdiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cdiz03016
]
CEDIAZO_02677 (truB)
Enzymes [BR:
cdiz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CEDIAZO_02677 (truB)
Transfer RNA biogenesis [BR:
cdiz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CEDIAZO_02677 (truB)
Prokaryotic type
CEDIAZO_02677 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CAG9297492
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All DBs
Position
CEDIAZO_genome:complement(2854934..2855872)
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AA seq
312 aa
AA seq
DB search
MARRTRGRKVDGILLVDKPTGKTSNAVLQQVKRIYFAQKAGHTGALDPLATGMLPICLGD
ATKFSQYLLESDKRYQVCAKLGQRTTTSDADGEVVETREVNVTIAQIEQALERFKGVIEQ
VPSIYSALKYQGKPLYWYAREGIDVPRKSRPITVYSIDIINFEDDLLKLDIHCSKGTYIR
TIVDDLGELLGCGAHVAQLHRSHVGDYPSDQVISLQRLEALLEQATEQEIVPAELLDPLL
LKMDSAVSCLPTIDVSEELGLLLMQGRAVELDNVAKGALLRLYVGDERRFIGIGMVNEDG
LLAPKRLIALDA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtaggacccgtggccgcaaagtggatggtattttactggtggataaacccacc
ggtaaaacttcaaatgcggtactgcaacaggtaaaacggatctattttgcacaaaaagct
ggccatacaggggcgttagaccctctggcaacgggtatgctgcctatttgtttaggtgat
gcaacgaagttttcacaatatctgcttgagtctgataaacgctatcaggtttgcgcaaaa
ctagggcaacgaacgaccacatctgatgcggacggcgaggtggttgaaactcgtgaagtc
aatgtcacgatcgcgcaaatagaacaagcattggagcgctttaaaggtgtgattgagcag
gttccatcgatttattcagctcttaaatatcaaggcaagccgctttactggtatgctcgc
gaagggattgatgtcccgcgtaaatcacggccaattactgtttatagtattgatattatc
aattttgaagacgatttgttaaaacttgatatccattgcagtaaagggacctatattcgc
actattgttgatgatttaggtgagttactaggctgcggagctcatgtggcgcaattgcat
cgctctcatgtcggtgattatccatcggatcaggtgattagtttacagagacttgaagca
ttattagaacaggcaacagagcaggagattgttcccgcagagcttcttgacccattactg
cttaaaatggatagtgcagtcagttgtttgccgactatcgatgtaagtgaagagttgggg
ttactgctgatgcagggtcgagctgttgaacttgacaatgttgctaaaggggctttattg
cgtctttatgttggagatgaacgccgctttattggtatcgggatggtgaatgaggatggc
cttttagcgccgaagcgattaatcgcgctcgatgcttga
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