Celerinatantimonas diazotrophica: CEDIAZO_03693
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Entry
CEDIAZO_03693 CDS
T07531
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
cdiz
Celerinatantimonas diazotrophica
Pathway
cdiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEDIAZO_03693 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdiz03019
]
CEDIAZO_03693 (rhlB)
Enzymes [BR:
cdiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CEDIAZO_03693 (rhlB)
Messenger RNA biogenesis [BR:
cdiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEDIAZO_03693 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAG9298488
LinkDB
All DBs
Position
CEDIAZO_genome:3996444..3997769
Genome browser
AA seq
441 aa
AA seq
DB search
MSKKHLTDQKFANLDLQPQVLKALEQQGYEYCSAIQAESLPILLQGNDIAGQAQTGTGKT
LAFLIATFNHLLVTPELPQRQTNQPRAVVMAPTRELAIQIHRDAKILAKETGLKMGLVYG
GEGYESQRQVLDEGVDILIGTTGRMLDYYKQGIFDLKAVQVLVLDEADRMFDLGFIKDIR
YLIHRMSTPKERLNMLFSATLSYKVKELAFEHMNEPKHIVIEPEHMTSERISEELFYPSN
NEKMALFQTILEEEWPDKAIVFANTKHRCEEIWAHLKADGHRVGMLTGDIAQRKRSKILE
QFTQGSIDILVATDVAARGLHIPHVTVVFNYDLPDDAEDYVHRIGRTGRAGETGKAISLA
CEEYVFNLPAIEEYIKHTIPVTQHNPEAILDDLPAPVKIHRSRNNNRGGSNKKNGDRSRR
GNSRNRRRSNSGSHNSHAKQA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaacacttaacagaccagaaatttgccaatctggacctccaaccacaagtg
cttaaagcactggagcagcaaggctacgaatattgcagtgctattcaggcagaaagtctg
ccgattttactgcaaggaaacgatattgccggtcaggcgcaaaccgggactggcaagact
ttagcgttcttaattgccacatttaaccacctgctggtcactcccgaattaccgcagcgt
caaaccaatcagcctcgcgcggtggtgatggcacctacgcgggaattagccattcaaatt
caccgtgatgccaaaatactggctaaagagaccggactaaaaatggggttagtctacggc
ggtgaaggttatgaaagccagcgccaagttctcgatgaaggtgtagatatactgatcggc
accaccgggcggatgctcgattactacaaacaggggatttttgatcttaaagccgtgcaa
gtattggtgcttgatgaagccgaccggatgttcgatttaggatttatcaaagatattcgc
tatttaatccatcgaatgagtactccgaaagagcgattaaacatgctattttccgcaacc
ttgtcgtataaggtcaaagaactagcattcgaacacatgaatgaaccgaaacacattgtg
atcgaaccagaacatatgaccagtgagcggatctctgaagagctattttatccatctaat
aacgaaaaaatggcgctattccaaactatccttgaagaggaatggcccgacaaagcaatt
gtgtttgccaataccaaacatcgctgtgaagagatttgggcccacttaaaagccgatggc
catcgcgtcggaatgcttacgggtgacattgctcaacgtaaacgctcaaaaatcttagag
cagtttacccaaggcagtattgatattctggtcgcaaccgatgttgcagcgcgtggacta
catattccccatgttacggttgtctttaactatgacctgcctgatgatgcagaagactac
gttcaccgtattggccgaacaggtcgcgcgggggaaaccggcaaagcaatcagcttagcc
tgtgaagagtatgtcttcaacttgccagctatcgaagagtacatcaaacatacgatcccg
gtcacccagcacaatcctgaggcaattttagatgacctgccagccccggtaaaaattcac
cgttcacgtaataataaccgtggcggtagtaataaaaaaaatggtgacaggtcccggcgc
ggcaattctcgcaaccgtcggcgcagtaatagtggctcgcacaacagccatgccaaacaa
gcttag
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