Carnobacterium divergens: BFC22_02240
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Entry
BFC22_02240 CDS
T05644
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cdj
Carnobacterium divergens
Pathway
cdj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFC22_02240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdj03021
]
BFC22_02240
03400 DNA repair and recombination proteins [BR:
cdj03400
]
BFC22_02240
Enzymes [BR:
cdj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFC22_02240
Transcription machinery [BR:
cdj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFC22_02240
DNA repair and recombination proteins [BR:
cdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFC22_02240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANZ98992
UniProt:
A0A2R7ZTM7
LinkDB
All DBs
Position
489083..492712
Genome browser
AA seq
1209 aa
AA seq
DB search
MIDVNNFENMQIGLASPDKIRSWSYGEVKKPETINYRTLKPERDGLFCERIFGPSKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDAGDTSLERKQLLTEREYRDKREQYGQNFQAAMGAEAIKQLLD
DVQLEKEVAELKEELKSAQGQKRTRAIRRLDILEAFRHSGNEPSWMVMDVVPIIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MAIELFKPFVMKELVARDLASNIKNAKRKIDRQDEGIWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCEAYNADFDGDQMAVHVPLSDEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEEQREGEGMVFKDLTEALIAYQNGYVHLHSRIGVQ
TTSLKDKPFTEWQKERTLITTVGKLLFNEIMPVEFPYLNEPTTENLEVAISDRFFVEPGT
DIPAHIKKQEINLPFKKKNLGNIIAEVFKRFHITETSKMLDRMKDLGYKHSTRAGITVGI
ADIVVLHEKQEILDEAHKQVDNVTKQFRRGLITDEERYERVIGIWNSAKDRIQIKLMESL
DAKNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGQIMELPITSNFREGLTVLEMFIST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGLDISAIKEGNEVIEPLE
ERLLGRYTRKTIFHPENGSVIMKENEIITEDLAKEIMDAGIEEVSIRSVFTCNTKHGVCK
HCYGRNLATGSEVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVITEVTGEIIAISENAAERTKEVTIKGTTDTRSYPVPYTARLKVAEGDTIH
RGEALTEGSIDPKQLLRVRDVLSVENYLLREVQKTYRMQGVEIGDKHIEVMVRQMLRKVR
VMDPGSTEILPGTLMDISEFTDKNYETIMAGNVPATGRPVLLGITKASLETNSFLSAASF
QETTRVLTDAAIRGKRDPLLGLKENVIIGKIIPAGTGMAKYRNMEPKGIGVVSENVYSIN
DTIEPKTDF
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacgttaataattttgaaaacatgcaaatcggtttagcatctccagacaagatt
cgtagttggtcttatggagaagtgaaaaaacctgaaaccattaactaccgtacactaaaa
ccagaacgcgatggcttgttctgtgaacgcatttttggcccatcaaaagactgggaatgt
gcttgtggtaagtacaaacgtattcgctataaaggaattgtttgtgatcgttgtggagtg
gaagtaacaagatctaaagttcgtcgtgaacgtatgggtcacatcgaattagcagcacct
gtttcacacatttggtatttcaaaggaattccaagtagaatgggtcttgtcttagatatg
agcccacgtgctcttgaagaaatcatttattttgcttcgtatgttgttaccgatgcaggt
gacacctctttagaacgcaaacaattgttaactgaaagagaatatcgtgataaacgtgaa
caatatggtcaaaacttccaagcagcaatgggagcagaagcaatcaaacaattgctagat
gatgttcaattagaaaaagaagtggctgaattaaaagaagagttaaaatctgctcaaggg
caaaaaagaactcgcgccattcgccgtttagatatcttagaagcattccgtcattcaggt
aatgaacctagctggatggttatggacgttgttccaatcattcctccagatttacgccca
atggttcaattagaaggtggacgctttgcaacgagtgatttaaatgatttatatcgtcgt
gtaatcaaccgtaacaaccgtctaaaacgcttattggacttaaatgcaccaaatattatc
gtgcaaaatgaaaaacgtatgcttcaagaagccgttgatgccttgattgataatggtcgt
cgtggccgtccagttactggaccaggtaaccgtccattgaaatcattgtcacatatgctt
aaagggaaacaaggtcgtttccgtcaaaacttactaggaaaacgtgtcgattattctggt
cgttccgttatcgtagtaggtccaaacttgaaaatgtaccaatgtggacttccaaaagaa
atggccattgaactattcaaaccatttgtaatgaaagaactagttgcacgtgatcttgca
agcaacatcaaaaacgcgaaacgtaaaattgatcgtcaagatgaaggtatctgggatgta
ttagaagacgttattcgtgaacatccagtattgcttaaccgagcacctactcttcataga
ttaggaatccaagcctttgaaccaactctagttgaaggacgcgcaattcgtcttcaccca
ttagtatgtgaagcctacaatgccgatttcgatggagaccaaatggcggttcacgttcca
cttagtgatgaagcacaagctgaagcacgtatgttgatgctagctgcccaaaatatctta
aatccaaaagatggtaaaccagttgtaactccttctcaagatatggtattaggtaactac
tacctaacaatggaagaagaacaacgtgaaggcgaaggaatggtctttaaagacttgact
gaagcgttgattgcctatcaaaatggatacgttcatttacattcaagaattggtgttcaa
acaacgtccttaaaagacaaaccgtttactgaatggcaaaaagaacgtacattgattacg
acagtagggaaattacttttcaatgaaatcatgcctgtagaattcccttacttgaatgaa
ccaactactgaaaacttagaagttgctatttcagatcgtttctttgtagagccaggaaca
gatatcccagctcatattaaaaaacaagaaatcaatttaccatttaaaaagaaaaatctt
ggaaatatcattgccgaagtcttcaaaagattccatatcactgaaacttctaaaatgtta
gatagaatgaaagacttaggttacaaacattctacacgtgctggtattacagtaggtatc
gctgatatcgtagtactacatgaaaaacaagaaattttagatgaagctcataaacaagtt
gataacgtaacaaaacaattccgtcgtggtttaatcactgacgaggaacgttacgaacgc
gttattggcatttggaattcagctaaagaccgtatccaaattaaattaatggaaagttta
gatgcgaagaacccaatcttcatgatgagtgactctggagcccgtgggaatatttccaac
tttactcagcttgctggtatgcgtggacttatggccgctcctaatggacaaatcatggaa
ttgccaatcacatcaaacttccgtgaaggtttaaccgtcttagaaatgtttatctcaacc
catggagctcgtaaaggtatgaccgatacagcccttaagactgccgattcaggttacttg
actcgtcgtctagttgacgtagcacaagatgttatcattcgtgaaacagactgtggtact
gatcgtggcttagatatttcagcaatcaaagaaggaaacgaagtcattgaacctcttgaa
gagcgtttacttggtcgttacactcgtaaaactattttccatccagaaaatggttcagtt
atcatgaaagaaaacgagattatcactgaagatcttgcaaaagaaatcatggacgctgga
atcgaagaagtatcaatccgttcagtatttacatgtaacacgaaacatggtgtatgtaaa
cattgttatggtcgtaaccttgcaacaggttcagaagttgaagttggggaagcagttggt
acaattgccgctcaatcaatcggagaaccaggtacccaattaacaatgcgtactttccat
acaggtggggttgccggagatgatattactcaaggtttacctcgtatccaagagatcttt
gaagctcgtaatcctaaagggcaagcggttatcactgaagttactggtgaaatcattgcc
atttcagaaaatgctgctgaacgcactaaagaagtgacaatcaaaggaacaacggatact
cgtagctatccagtaccttataccgctcgtttgaaagttgcagaaggcgacacgattcat
cgtggagaagcacttactgaaggatcaatcgatccaaaacaactattacgtgttcgtgat
gtattatctgttgaaaactacctattacgtgaagttcaaaaaacttaccgtatgcaaggg
gtagaaatcggcgataaacatatcgaagtaatggttcgtcaaatgttacgtaaagtccgc
gttatggatccaggttcaacagagattttaccaggaacattgatggacatcagcgaattt
acagacaaaaactacgaaacaattatggcaggaaatgtaccagcaactggtcgtcctgta
ctacttggaatcacaaaagcttctcttgaaacgaacagtttcttatcagctgcatctttc
caagaaacaactcgtgtgttaacagatgctgcaattcgtggaaaacgtgatccgttactt
ggtcttaaagaaaatgttatcattggtaagatcattccagctggtaccggtatggctaaa
taccgtaacatggaaccaaaaggaattggtgttgtgagtgaaaatgtttacagtattaat
gacacaattgaaccaaaaacagatttctaa
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integrated database retrieval system
