Carnobacterium divergens: BFC22_02710
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Entry
BFC22_02710 CDS
T05644
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cdj
Carnobacterium divergens
Pathway
cdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BFC22_02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdj03019
]
BFC22_02710
03009 Ribosome biogenesis [BR:
cdj03009
]
BFC22_02710
Enzymes [BR:
cdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BFC22_02710
Messenger RNA biogenesis [BR:
cdj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BFC22_02710
Ribosome biogenesis [BR:
cdj03009
]
Prokaryotic type
rRNA helicases
BFC22_02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANZ99083
UniProt:
A0AAW8RGK3
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All DBs
Position
583391..584842
Genome browser
AA seq
483 aa
AA seq
DB search
MEKATFSDYEISTDIVKALSGLGYAVPTKVQKEVIPLALAGMDVIVTSQTGSGKTASFGI
PLCEKVLWEENKPQALVLVPTRELALQVKEDITNIGRFKRIKATAVFGKASFVTQKSELK
QKSHIVVGTPGRVLDHLEKGTLAVDKLQYLVLDEADEMLNMGFIDQVEAIIDFLPKANRQ
TLLFSATMPQDIQRLASSYMSADATSVTIETTAASQPKILQSYIVVEEDKKPQQLLDLLT
VENPDTCMIFCNTQEHVNNLYQFLNKEGLPVDKIHGGMVQEDRFEVMDDFRRGKFRYLVA
TDVAARGIDVDSVTHVINYDVPVEKESFVHRTGRTGRAGKTGIALTLVLPKEKNWWREIR
DYVTGEILEITPPSPRFVLRHKAAFDKKISERPRLKKDKGLALSEDILKLYFNGGKKKKI
RAVDFVGTLTSIPGITSEDIGIITIQENVSYVDILNGKGMIVLDAMRNKTVKGKQLKVHE
ARK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcgacattttcagattatgaaataagtacagatatcgtcaaggctttgagt
ggcttaggctacgcagttccgacgaaagttcaaaaggaagtcattccgctagcattagca
ggaatggatgttattgtaacgtctcaaacaggaagtggaaagacagcaagttttggcatt
ccattgtgtgagaaagtattgtgggaagaaaataaacctcaagctttagtgctggtgcca
acaagagaactagccttgcaagttaaagaagatattacaaatattggtcgtttcaaacga
attaaagcaacggctgttttcgggaaagcttcttttgttacccaaaaatcagaattaaaa
caaaaaagtcatattgtagtaggtacgccggggcgtgtgttggatcatttagaaaaaggc
acattagctgtggataaattacaatatttagttttagatgaagcagatgaaatgttaaat
atgggctttatcgatcaagtagaagcgattattgactttctaccaaaagcaaatcgccaa
acgctattgttttcagcaacgatgcctcaggatatccaacgtctagcaagctcgtatatg
tctgctgatgctacatccgtgacgattgaaacgacggcggcttcacaaccgaaaatttta
cagtcttacattgtagtggaagaagataaaaaaccgcaacaattattagacttattaact
gtggaaaacccagatacgtgtatgattttctgtaatacacaagaacatgtgaataactta
taccaatttttaaataaagaaggcttacctgtggataaaattcacggtggtatggtacaa
gaagatcgctttgaagtaatggatgactttagacgcggtaaattccggtatttagtagca
acagatgttgcagccagaggaattgatgtggatagcgttactcatgtcatcaactatgat
gtacctgttgaaaaggaaagctttgtccacagaacaggcagaactggacgggctgggaag
accggaatcgcattgacgttagtattgccaaaagagaaaaactggtggcgcgagattcgt
gactatgtaacgggtgaaattttagaaattacgcctcctagtccaagatttgtgctgcgt
cataaagcggcatttgataaaaaaatcagcgaacgccctcgtttgaaaaaagataaaggg
ttagcgttaagcgaagatattttaaaactttattttaacggtgggaaaaagaaaaaaatt
cgtgcagttgattttgtcggaaccttaacaagtattcctggaatcacttctgaagacatc
ggaattattaccatccaagaaaatgtgagttatgttgatattttaaatggtaaaggcatg
attgttttagacgcgatgagaaataaaaccgttaaaggtaagcaattaaaagtacacgaa
gctagaaaataa
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