Carnobacterium divergens: BFC22_03720
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Entry
BFC22_03720 CDS
T05644
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cdj
Carnobacterium divergens
Pathway
cdj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BFC22_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdj03400
]
BFC22_03720
DNA repair and recombination proteins [BR:
cdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BFC22_03720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BFC22_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
AAA_21
nSTAND3
AAA_23
AAA_22
AAA_33
APS_kinase
AAA_25
DnaJ_CXXCXGXG
NACHT
AAA_18
AAA_24
AAA_14
MMR_HSR1
ATPase
Viral_helicase1
ATPase_2
NB-ARC
cobW
DUF87
RNA_helicase
Septin
MeaB
NTPase_1
PRK
Dynamin_N
Frankia_peptide
FtsK_SpoIIIE
DUF463
Motif
Other DBs
NCBI-ProteinID:
ANZ99265
LinkDB
All DBs
Position
824654..827497
Genome browser
AA seq
947 aa
AA seq
DB search
MANDKITVHGARSHNLKNIDVTIPRDKLVVLTGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEINDYLRLLYARVGHP
ICPNDGTEITSQTVEQMVDRVLELPEKTKIQILAPVVVGKKGQHKKVFDMIKREGYVRLR
VDKEMYDISDEIELEKTKKHDIDIVIDRIVVKEGIRSRLFDSFEAALRLAEGYAVADVIG
KEEILFSEHYACPYCGFTVGELEPRLFSFNAPFGACPECDGLGMKLEVDLDLVIPDKKKT
LREGAIAPWNPISSNYYPQMLEQACLHFKIDLDTPFEKLPESAKELILNGSDGKLFHFHY
ENDFGGIRDVDVPFEGVVRNISRRHDETNSDFTREQMRTYMTELPCQTCNGYRLNRQALS
VKVNGTDIGQVCEYAIGDAVEFFDHLTLSNQEEMIAKPILKEVHSRLRFLENVGLDYLTL
SRTAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIGSLKKMRDLGNT
LIVVEHDEDTMREADYLIDIGPGAGERGGEIMAAGTPAEVERNPNSLTGEYLSGKKFIPI
PEKRRKENKGKIRVTGATENNLKNLTVDFPIGRFVAVTGVSGSGKSTLVNSILKKALSKE
LTRTKAKPGKFKKITGYEELEKVIDIDQSPIGRTPRSNPATYTSVFDDIRDLFAQTNEAK
IRGYKKGRFSFNVKGGRCEACRGDGILKIEMHFLPDVYVPCEVCHGTRYNSETLEVHYKG
KNISEILNMTVEEAVKFFEHIPKIHRKLATIVDVGLGYVTLGQPATTLSGGEAQRMKLAS
ELHKKSNGKSFYILDEPTTGLHTDDIARLLVVLNRLVESGNTVLVIEHNLDVIKTADYLI
DLGPEGGAGGGTLVAKGTPEEVIKVKESYTGKYLAAILERDKARMKN
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgataaaattaccgttcatggcgcacgttctcataatttaaaaaacattgat
gttacgattcctcgtgataagttagtcgttttaactggactttcaggatctggaaaaagc
tcactggcatttgatactttgtatgcagaaggacaaagacgctatgttgaaagcttatct
gcatatgcacgacaatttttaggccaaatggataaaccagatgtagatagcattgatgga
ttgagccctgctatttcaatcgatcaaaaaaccactagtcgaaatccgcgttcaactgtt
ggaacagtcactgagatcaacgattatcttcgtttactttatgctcgagtagggcatcca
atttgtccaaatgatggaaccgagattactagtcaaaccgttgaacagatggttgatcgt
gtgttagagctacctgaaaaaacaaagattcaaatattagctcctgttgttgtagggaaa
aaaggacaacataaaaaagtattcgatatgattaaacgagaaggttatgttcgtcttcgt
gtcgataaagaaatgtatgatatctctgatgaaatcgagcttgaaaaaacaaaaaaacat
gatattgatattgtcattgaccgtattgttgttaaagaaggcattcgttcacgtttattt
gattcatttgaagcagcattgcgtttggcagaaggttacgccgttgcagacgtgataggc
aaagaagaaattttatttagtgaacactatgcatgtccttattgtggctttacagtagga
gaattagagcctcgtttattctcttttaacgcaccatttggagcttgcccagaatgtgac
ggcttaggaatgaaattagaagttgatttggatttagttattcccgataaaaagaaaaca
cttagagaaggtgcaattgctccttggaatccaattagttctaattattaccctcaaatg
ttagaacaagcctgtcttcatttcaaaattgatttagacacaccttttgaaaaattgcca
gaatcagcaaaagagttgattctgaatggttcagatggtaagttatttcacttccattat
gaaaatgattttggtgggattcgtgacgtggatgttccttttgaaggcgttgttcgcaat
atctctcgaagacatgatgaaaccaatagtgattttacaagggagcaaatgcgtacctat
atgacggagttgccttgtcaaacttgtaacggttatcgtttaaatcgccaagcgttgtct
gttaaagtcaatggaacggatatcggacaagtttgtgaatacgcaattggagatgctgtt
gaattctttgaccatttaacattgtccaatcaagaagaaatgattgcaaaacccatcttg
aaagaagttcattcacgattaagatttctggaaaatgtcggattagactatttaacgtta
agtagaactgcgggcacattatctggtggagaagctcaaaggatccggttggctacacaa
attggctcaaatttgtcaggtgttctttatattcttgatgaaccctctattggtctacac
caacgggacaacgatcgcttgattggttccttgaaaaaaatgcgagatttagggaataca
ctaattgttgtggaacatgatgaagatacaatgcgtgaagcagactatttaattgatatc
ggtcctggtgctggagaacgtggtggggagattatggctgccgggacaccagcagaagtc
gaaagaaatcccaattctttaacaggtgagtatttatctggtaagaaatttattccgatc
ccagaaaaaagacggaaagaaaataaagggaaaatacgagttactggcgctacggaaaat
aacttgaaaaacttaaccgttgattttccaattggacgttttgttgcagttactggtgtt
tcaggctcaggaaaaagtacactagtaaatagtattttgaagaaggctttgtcaaaagag
ctgacacgaacaaaagcgaaaccaggtaagttcaaaaaaataacaggctatgaagagcta
gaaaaagtaattgatatcgatcaaagtccaatcgggcgtacgccaagaagtaatccagcg
acttatacaagtgtatttgatgatattcgtgatttatttgcacaaacgaatgaagctaaa
attcggggctataaaaaaggacgttttagtttcaatgtaaaaggtggccgctgtgaggct
tgtcgtggagatgggattttaaaaattgagatgcattttttaccagatgtttacgttcct
tgtgaggtttgtcatggaacaagatataattctgaaacattagaagttcattataaaggt
aagaatatctctgaaattttaaacatgacagttgaagaagccgtaaaattctttgagcat
attccaaaaatccatcgcaaattagcaacgattgtggatgttggattaggctacgtaaca
ctgggtcaacctgcaacaactctttctggtggggaagcgcaacgaatgaaattagctagt
gaattgcataaaaaatcaaatggtaaaagtttttatattttagatgaaccaacaacagga
ttgcatacagatgatatcgcgcgtcttttagtcgtcttgaaccgcctagttgaatcaggt
aatacggtgcttgtaatcgaacataacttagatgttattaaaacagcagattacttgatt
gatttgggcccagaaggtggtgctggtggtggaacattagttgctaagggaactcctgaa
gaggtcattaaagtaaaagaaagctatactggaaagtatttagcagcaattttagaacga
gacaaagctcgtatgaaaaattaa
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