Carnobacterium divergens: BFC22_07180
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Entry
BFC22_07180 CDS
T05644
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cdj
Carnobacterium divergens
Brite
KEGG Orthology (KO) [BR:
cdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdj03400
]
BFC22_07180
Enzymes [BR:
cdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFC22_07180
DNA repair and recombination proteins [BR:
cdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BFC22_07180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_30
ResIII
NTPase_1
NACHT
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ANZ99894
LinkDB
All DBs
Position
1544685..1548479
Genome browser
AA seq
1264 aa
AA seq
DB search
MSHKLPVKPLNSRFTDGQWQAVYEEGHNILVSASAGSGKTTVLVQRVIEKIKSGVNVDEL
LIVTYTESAAREMKERIQVAIQKAITQEGEAESKRHLVKQVSLLSQASISTLHAFCLQVI
RRYYYLIDLDPVFRLLTDETEMLLLKEDVWEELREELYGEEKNAFYELTANYSGDRNDDG
LTKLIFSLYEFSRANPNPALWLTQLSDLYRITSTDIGKSKLFLELLKPQILEILKSLIQV
SRSAVVLADGTEELKKHYDLVASEAVFFEELVELVDTNNYNAAFQFISDFSFGRIPTVKK
SADEAVKEAGKEIKMLRDQYKKRFGELKDSYFYTKPINMLEIMASAAPLVDEMARVTQLF
TDAYRKEKARRNVLDFNDLEHLTHQILATYTDEQWLGTTASDYYREKFQEVLVDEYQDVN
KLQESIVYWLTKHGEEEKGNLFMVGDVKQSIYSFRLADPSLFLTKYEQFGEHRNGERIIL
AENFRSRGEVLHFTNLIFQQLMDKTVGQMAYDEAAKLIHGFPNFPESTLHQPEILIYEKG
TSVSEEEETEVESLEWNMRIDDKTEGELLMVGQKIQQLIASEFPIYDKELKQNRPIHYQD
IVLLTPTKKNNLVLLDIFKRLEIPIHVNDTQNYFQTTEIKIMMSLLKVIDNPYQDIPLAA
VLRSPIVGLDENELASIRITKKTGEYYEALESFYHQYEGRDKASHFTTALYEKIAKFRSQ
LLSWREMARREELVRLIWRIYEETGFLDYVGGMSAGKQRQANLHALYERASRYEASSFKG
LFQFVRFIEKMQEKEKDLAEPTAVAPDEKAVRVMTIHASKGLEFPVVFILDLTKRFNLQD
TRSAYVFNEEYGVGTNYKDLEKRITYRTLPEIALKIEKKKKLLAEEMRKLYVALTRAEEK
LFLVGSYESQEAAWKEWGSVSNHKEVVLPSDMRLTASHMMKWIGSTLVRHPSSQNDYVTE
IAPIGEICQHPASFSIEFKNEEDIQESMKLVTSQTERNILVELAEQTYDVQEVEANQKLQ
KAIQLMDFTYPYEGATRTTSYQSVSEIKRLFEEPEDTRMVKIDINQPRNRFVEQKLARPK
FMQELTEPTAAEIGTATHLVMQSIDLKEKPTFQSLEKLIKKLVEEELVTPQIEKKLSINQ
MLQFFETELGNQLVNYHSLVRREQPFSLLMRAEDIFHDMDEQTEDKILIHGIVDGFIEFD
DYIILYDFKTDYVPKNGTEKIIQKYRGQLNLYQEALSSILGKPVKKSYICLLSIGEVFQM
NASV
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataaattacctgttaagccacttaatagtcgttttaccgatggccaatggcaa
gctgtctatgaagagggacacaatattttagtttcggcttctgctggctcaggaaaaacc
actgtcttagtgcaacgagtaattgaaaaaattaaaagtggagtgaatgtagatgaactt
ttaattgttacctatacggaaagtgctgcaagagaaatgaaagaacgtattcaagtagcg
attcaaaaagccattacacaagaaggggaagcggaatcaaaacgtcacttggttaaacag
gtttccttactttcacaggcttctatcagcacactacatgctttttgtctacaagtgatt
agacgttattactatttaattgatttagatccggtgtttcgtttgctaacggatgaaaca
gaaatgttgttattgaaggaagatgtttgggaagaacttagagaagaactttatggagaa
gaaaaaaatgctttttatgagctaacagcgaattattctggagatcgaaatgatgatggt
ttaacaaagttgattttttctttatatgaattttcaagagcaaatccaaacccagcttta
tggttaactcaattatctgatttgtatcgcatcacttcaactgacatcggaaaatctaaa
cttttcttagaattactaaaaccacaaattcttgaaattcttaaaagcttgattcaagta
agccgttcggccgttgttttagccgatggaacggaagaattaaaaaaacattacgactta
gtagcaagtgaagcagtcttttttgaagagttagttgaattagttgataccaataactat
aatgctgcgtttcaatttatctctgactttagttttggtcgtattcctaccgttaaaaaa
tcggcggatgaagcggttaaagaagctggaaaagagataaaaatgttacgggatcaatat
aaaaaaaggtttggtgaattaaaagatagctatttttacacaaaaccgattaatatgtta
gagattatggcaagtgcagcaccgttagttgatgaaatggcacgagtaacccaactcttt
acagatgcctatcgtaaggagaaagcgagacgaaacgtactggatttcaatgatttggag
catttaacacatcaaattttagcgacatatacggatgagcagtggttaggaacaacggct
tctgattattaccgtgaaaaatttcaagaagtcttagtagatgaatatcaagatgtcaat
aagctacaagaaagcattgtttattggttgacgaagcacggtgaggaagaaaagggcaat
ttatttatggtaggagacgttaaacaatcgatttattccttccgtttagcagatccatcc
ttgtttttaactaaatatgaacagtttggggaacatcgaaatggagagcggattattctg
gcagaaaatttccgttcacgaggagaagtattgcactttaccaatttaatttttcaacaa
ttaatggataaaaccgttggtcaaatggcttacgatgaagctgcaaaattgattcacggc
tttcctaattttccagaaagtactcttcatcaaccggaaatattaatttatgaaaaaggt
acgagtgtatcagaagaagaggaaacagaagttgaatctcttgaatggaatatgcgaatt
gatgataaaacagaaggggaattattaatggttgggcaaaaaattcagcaattaattgcc
agtgaatttccaatctatgataaagagttaaaacaaaatcgtccaattcactatcaagat
attgtactactaactccgacaaaaaaaaataatttagtattactagatatttttaagcgt
ttggagattcctattcatgtcaatgatacacaaaattattttcaaacgactgaaatcaaa
attatgatgtctttactaaaagtgattgacaatccttatcaagatattccattagcggct
gttttaagatcaccaattgtgggtttagatgaaaatgaattggcatccatccggattact
aagaaaacaggagaatattatgaagcattagaatctttttatcatcagtacgaaggtcga
gataaagctagtcattttacgactgcactttatgaaaaaattgcgaagtttcgtagccaa
ttgctaagctggcgagagatggcgagacgagaagaattggttcgcttaatttggcgtatt
tatgaagaaactggctttttagattacgttggtgggatgagtgccggaaaacaaagacaa
gccaatcttcatgctttgtatgagcgcgcaagtcgttatgaggcaagtagttttaaaggt
ctctttcaatttgtccgttttattgaaaaaatgcaagaaaaagaaaaagatttagcagag
ccgactgccgttgcaccagatgaaaaagcagttcgtgtgatgacgattcatgcaagtaaa
ggtttagaatttcccgttgtatttatcttagacttaacaaaacgatttaatttacaagat
acaagaagcgcatatgtattcaatgaggaatatggtgtggggacgaattataaagattta
gaaaagcgaattacctatcgaaccttaccagaaatcgctttgaaaatagagaaaaagaaa
aaacttttagcagaagaaatgcgtaagttatatgtagccttaacaagagctgaagaaaaa
ttatttctagtaggttcttatgagagtcaagaagctgcttggaaggaatggggaagcgtt
agcaaccataaagaagttgttttaccaagtgatatgcgattaacagccagtcatatgatg
aaatggattggttcaacgcttgttcgtcatccaagtagtcaaaacgattatgtgacagaa
attgctccaattggtgaaatttgtcaacatccagcctctttttcgattgaattcaaaaat
gaagaggacatacaagagtcaatgaagctggttacaagtcaaacagaacgaaatatttta
gttgagttagctgaacaaacctatgatgttcaagaagttgaagcgaatcaaaaacttcaa
aaagcaatccaattaatggatttcacctatccttacgagggggcaacacgaacaacaagt
tatcaatcggtttcagaaatcaaacgtctatttgaagaaccagaagatacacgtatggta
aaaattgatatcaatcaaccaagaaatcgatttgttgaacaaaaattagctcgccctaaa
tttatgcaagaattaactgaaccaacagctgcagaaattggaacagcgactcatttggtc
atgcaatcaattgatttaaaagaaaaaccaacttttcaatcactggaaaaattaatcaaa
aagttagttgaagaagagttagtgactcctcaaattgaaaaaaaactatcaatcaatcag
atgctgcaatttttcgaaacggaactagggaatcaattagttaactatcattcgttagtg
cgtcgagagcaacctttttcattattaatgagggcggaggatattttccatgatatggat
gagcagacagaagataaaattttaattcacggaatcgtagatgggtttattgaatttgat
gactatattatattgtatgattttaaaacagattatgttcctaaaaatggaactgaaaaa
attattcaaaaatatcgaggtcaattaaatttgtatcaggaagcattatcctcaatttta
ggaaaacccgtcaaaaaaagctatatttgtttgttatcaattggagaagtttttcagatg
aacgctagcgtttaa
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