Carnobacterium divergens: BFC22_09350
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Entry
BFC22_09350 CDS
T05644
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cdj
Carnobacterium divergens
Pathway
cdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BFC22_09350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdj03400
]
BFC22_09350
Enzymes [BR:
cdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BFC22_09350
DNA repair and recombination proteins [BR:
cdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BFC22_09350
RecFOR pathway proteins
BFC22_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
AAA_14
Sigma54_activat
nSTAND3
DUF815
NB-ARC
AAA_3
RNA_helicase
AAA_25
MCM
NTPase_1
AAA_24
TsaE
AAA_33
Bac_DnaA
IstB_IS21
AAA_18
Sigma54_activ_2
Rad17
AAA_17
ABC_tran
NPHP3_N
Parvo_NS1
AAA_19
AAA_11
NACHT
Motif
Other DBs
NCBI-ProteinID:
AOA00302
UniProt:
A0AAW8RB42
LinkDB
All DBs
Position
complement(1994342..1995358)
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AA seq
338 aa
AA seq
DB search
MTFEERIVSGESEDGVEITIEKSLRPQTLAQYIGQDKVKKELTIYIEAAKNREEALDHVL
LYGPPGLGKTTMAMVIANEMQVGIRTTSGPAIEKAGDLVALLNELEAGDVLFIDEIHRMP
RMVEEMLYSAMEDFFVDIIVGQGPSAHPVHFPLPPFTLIGATTRAGLLSAPLRDRFGIVS
HMEYYPVKDLKEIVIRSADVFQTKINDTGAHEIARRSRGTPRIANRLLKRVRDYAQVEGE
GEVSQRMADEALALLRVDQEGLDYVDQKMLTTMIELYRGGPVGLSTIAANIGEETETVED
MYEPYLLQMGFLQRTPRGRIVTPLGYEHLGYSYPIEKN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaagaacggattgtttctggtgaaagcgaggacggagtagagataacaatt
gaaaaatctttacgccctcaaacgttagctcaatacatcggccaagacaaagtaaaaaaa
gagttaacgatttacattgaagcagctaaaaaccgtgaagaagcattagaccacgttctc
ttatacggtccaccaggtttagggaaaacaacaatggcaatggtaattgcaaatgaaatg
caagtaggaattcgaacgaccagtggtccggcaattgaaaaggctggcgatttggtggcg
ttattaaatgaattagaggcaggagacgttctgtttatcgatgaaatccatcgcatgcct
cgaatggtagaagaaatgctgtattccgcaatggaagacttttttgttgatattattgtt
ggacaaggtccaagcgctcaccccgtccattttccattgccgccctttacgttaattggt
gcgacaacaagagcaggtttgttatctgcgcctttaagggatcgatttggaatagtttcc
catatggaatattatccagtaaaagatttaaaagaaatcgtgatccgctcagcagacgtt
tttcaaacgaaaatcaacgatacgggagcccatgaaattgctagacgctcaagaggaacc
ccgcggattgcgaatcgcttattaaaacgcgtgcgagattatgctcaagtcgaaggcgaa
ggtgaagtcagtcaaagaatggcagatgaagcgctagccctattacgagtcgatcaagaa
ggattggattatgttgatcaaaaaatgctgactacgatgattgaattgtatcgtggaggg
ccagtaggtttgtcaacgattgcagctaatattggagaagaaacagaaaccgtagaagat
atgtacgaaccgtatttattgcaaatgggttttctgcaacggacaccaagaggacggatt
gtgacccctttaggctacgagcatttagggtattcttatcctatagaaaaaaattaa
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