Camelus dromedarius (Arabian camel): 105085172
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Entry
105085172 CDS
T04642
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
105085172 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdk03021
]
105085172 (SETX)
Enzymes [BR:
cdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105085172 (SETX)
5.6.2.5 RNA 5'-3' helicase
105085172 (SETX)
Transcription machinery [BR:
cdk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105085172 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
UvrD-helicase
AAA_30
AAA_22
nSTAND3
AAA_16
SLFN-g3_helicase
ResIII
Helicase_RecD
CxC6
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
105085172
NCBI-ProteinID:
XP_031306623
LinkDB
All DBs
Position
4:complement(63939592..64005281)
Genome browser
AA seq
2657 aa
AA seq
DB search
MSTCCWCTPGGVSTIDFLQRYASRIHSSEFQTANEDLCYCLECVAEYHKARDELPHLHEI
LWELETLRLINHFEKSMTAEMGDDDVYIVDNNGEAQLFDFTGQDFENKLRVPLLEILKYP
YLLLHERVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGKV
DRDDYYDLQEVLTCLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKNYWLGI
CMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMVILDRLG
SKVWGQLIDPIEAFQTIINNTSYNKEIQNIRNSSVRAKLEPESYFDDMVTCSQIVYNYNP
EKTKKDSGWRSAICTDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMDL
KDLGVAYIVEVIHHLHSEVKDVLNQPDAMCDKVTEFFLLILISVIELHRNKKCLHLLWVS
SQQWVEAVVKCAKLPTCAFARSSEKSSGNCSKGMGMISSLSLHSVPSNSVQLACVQLIRS
LLKEGYQLGQQTLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQACLKQIIRNIKFKVPQ
SSTFVGLSPLCETPFVSCEEESELLGKKPKKDMNNPTLSKQPLKAEMHHLQASILSKANN
EQNHIKDLKLDHLSAEPCLKQRSKNITERAQDQMKISTGKCKSVKENASCTPQHCTSRNG
PERVFDRGIIKLTDSSTDSLEKVSTSNEDFSLKDDTLGKTSKTKTKTQKDEICAKLSHVI
KKPHQKSSVVSSAVSLEENLPVSSIESFYSRKDLGQKGDGFMHNLSLDANGILDEKNGEQ
KSQNSLLLKKKQIKKEELDTPENSCQIQECHVGNKNLFAEMPNTIVKKTPFKDPVTVLET
RGKEISKCTDQVSSALREQAPSISPKSDILTDSQVDRDLHNLSLIAQASVTKFPSDLTPK
SSSQLQRKVKDDKRCFTANRNNGKTCREHVIVISDSDDDDDDDERTLGFEKLIKQDELCV
GKACPEQHTSVADTNVKQKVIKEEKTKSLLEFEESDSQFFEFESPFEMFSVWQDQKPDNN
SSVQEDEKNSCLTRIGDTTNNWGYDTDYVSGEVIKKVTEGVEEQAEPQRSISVEEFCEIE
VKKRKRKRYEKPVAEDHLRPSSVRSKDQSDLNEGELTEDDVKSADVRTTAPSSSIQRPTA
ASLKKSPPKLRTCSKPVRKVPLSKTPRKTHSDTRKGQNKSSSYISCRTTPAVVPPKKFRQ
CPEPASTVEKLGLKKAPRRAFELSQRSLDSISRLRDYGKTVGVVDTRKKAKLISPQTLSV
RNNKKLLTSQDLQLRRQMRPKLQQNRQRLLDCESTVTPRAGPHAAQDSDTFVPESDRSDY
SHKGGSEVAANNNEKQLKCVSSETEPTKAKHVSQVTDDPCLLNQCSSVVWNGRIPTSEVI
VSTSEDPLGGGDLTVHRLEVASLKEGEPESNSDIEGDDIFLTQRDPEDMDLCSQMEKEND
NLIEVVHGKDTVQVEEVSTSRPQLESVSSTKCKYKDCVETLKNQGEYCSKHSEAKAADED
VFRKPALPLSASKPSRPSTAKIFSSSSTSRIAHLSKSLENTSALPPALKKSTGIQSVLKV
PQPTSLVSQKPMGEVKSACNILHPQTPNNSSRQGYKVPLGESKSFPVSSPVNILSSQSVS
DTFVKEVLKWKYNMFVNFDQYGPPSSLCQSIARRVPVRFQDCGDYFNVFFPLMILNTFET
VAQEWISSPNKEKFHQLQLRKFPADYKKYWEFVVYLEECELAKQLHPKENDLVFLVPERL
NEEKKDLQRNFVLDPHEYHCGYVHKFRRTSVMRNGKSECSVSIQTQDNLPVSLSEFVKCI
VISSLVTTQRKLKAMSLLSGRNQLARAVLNPNPMDFCTKDLLTTTSERIIAYLRDFNEDQ
KKAIETAYAMVRHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTERRGHSDENSNAKIKQ
NRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFS
LDSQVNHRMKKELPSHVQEMHRRKEYLDRQLDELSRRRALCRGGREVQRQELDEKIVEVS
KERQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIV
DEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFYKLLEES
VEHNMVGRLPVLQLTVQYRMHPDICLFPSNYVYNRNLKTNRLTETNRCSSDWPFQPYLVF
DVGDGSERRDNDSYVNVQEIKLVMELIKLIKDKRRDVTFRNIGIITHYKAQKTMIQKDLD
KEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTITRAKYSLF
ILGHLRTLMENQHWNHLIQDAQKRGAIIKTCDKNYRHDAMKILKLKPVLQRSLTHPPAIS
PEASRPQGGLPSSKLDSEFAKTSFTSSVYLSPSDSKEATVTVTAKDPERPSIQDRLRDPR
LLRRFGLIPEAKEQCLGEPQPPSPQPPGAAPPSGEPGSPGSHQGPAGTGQQSAAKGATPS
NHRPHVQCDPPAASADAPTSKRKFDQEGGLSHRRETRAFSEGAQERCGSGSHHPKRNSGL
DERGLEEDSSLKRRRLL
NT seq
7974 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgttgttggtgtacgcctggtggtgtttccaccattgacttcctacagcgc
tatgcatccaggatccactccagtgaatttcagacagccaacgaagacctctgctactgc
ttagagtgtgtggctgaatatcacaaagcaagggacgaattgccacacttacatgagatt
ttatgggaattagaaaccttacgtctcataaaccactttgaaaaatccatgacggcagaa
atgggagacgacgatgtgtacatagtagacaacaatggggaggcacagctgttcgacttc
actggccaagactttgaaaataagctgcgagttcctcttctcgaaatactgaagtatcct
tatctacttttacatgagcgtgttaacgaattatgtgttgaagcactttgccgaatggaa
caagctaattgctcctttcaggtttttgacaaacatccagggatctatttgtttttggtc
catcccaatgaaatggttcggcgttgggctatcctgactgcaagaaacttggggaaagtg
gacagagatgattattatgacttacaggaggttttgacttgcctttttaaagtcattgag
ttggggcttttagaaagtccagacatttatacttcttctgtccttgagaagggtaaactg
attcttctgccctcacacatgtatgatactaccaactacaaaaactattggttaggtatt
tgcatgttgctgaccattctcgaggagcaagccatggattcactgttgttgggttcagac
aaacaaaatgattttatgcagtcgatacttcacaccatggaaaggcaatcagatgatgac
agtgtggatcctttctggccagctttacactgtttcatggtgattctggatcgccttgga
tctaaggtctggggtcaacttattgatcctattgaggcatttcaaaccatcatcaacaat
acgagctacaataaagagatccaaaatatacggaacagctctgtgagggccaagttagaa
ccagagtcgtattttgatgatatggtgacttgcagccagattgtgtacaattataatcct
gaaaagaccaaaaaggattcgggatggagatcagccatttgcacagattattgtcctaac
atgtatgaagaaatggaaacattagccagtgtgcttcagtcagatattggtcaagacatg
cgtgttcataacagcacatttctgtggttcatcccttttgttcagtccctcatggatctg
aaggatttgggtgtggcttacatagtggaggttattcatcatctgcattctgaagtcaaa
gatgtcctcaaccaaccagatgccatgtgtgacaaagtcactgagttttttcttctgatt
ttgatatcagtgattgaacttcataggaataaaaaatgtttgcatttgctgtgggttagt
tcccagcagtgggtggaagccgttgtaaagtgtgccaagcttcccacctgtgcgtttgca
cggagttctgagaagtcatctggaaattgctccaaaggaatgggaatgatatcgtctttg
tcattgcattcagtgccatccaactctgtgcagctggcttgtgtgcagctgattagaagt
ctccttaaagaaggttatcagcttgggcagcaaactctgtgtaagcgattctgggataag
ctcaacttattcctgcgaggaaatttatctttaggttggcagttgaccagtcaggaaacc
cacgagttacaggcttgtttaaagcaaattatcagaaacatcaaattcaaagtgcctcag
agtagcactttcgtgggtctgagtcctctgtgtgaaacccctttcgtatcttgtgaggaa
gaaagtgagctgttagggaagaaacctaaaaaggacatgaacaacccaacactttctaaa
cagccattgaaagctgagatgcatcacctgcaagcaagtattttgagcaaagcaaataat
gagcaaaaccacataaaagatctgaaactagaccacctctcagctgagccttgcttaaag
cagagaagtaaaaatatcactgaacgagctcaagaccaaatgaaaataagtacagggaag
tgtaagtctgtaaaagagaatgcctcatgtacaccgcagcattgtacctcaagaaatggt
ccagaaagggtatttgacagaggaataataaagttgactgattctagcactgattctctg
gaaaaggtgtccacatcaaatgaggatttctctttaaaggatgatactcttggcaaaacc
tcaaaaacaaaaactaagacacagaaagatgaaatctgtgctaagttatcacatgtaata
aaaaagccacaccagaaaagttccgtggtcagcagtgctgtcagtttagaggaaaacctg
cctgtatctagcattgagagtttctattcaaggaaggatctaggtcagaaaggagatggc
ttcatgcacaacctctctttggacgctaatggtattctggacgagaaaaatggagaacaa
aagtctcaaaacagtttattgctgaaaaagaaacaaataaagaaagaagagttggatacc
cctgaaaacagctgtcaaatacaggagtgtcatgttggtaataagaatttgtttgcagaa
atgcccaatactattgtgaagaaaacaccttttaaagatcctgtgactgtacttgaaaca
agaggtaaggaaattagcaagtgtaccgaccaggtttcttctgctttgagagaacaggcc
cctagcatcagtcctaagtctgacatcttaacagattctcaggtagacagagacctccac
aacttatctctaatagctcaagccagtgttactaagttcccatcagatttgaccccaaaa
agttcatcccagctacaaagaaaagtaaaagatgataaaagatgtttcacagctaaccga
aataacgggaaaacctgccgtgagcatgttattgttatctcagattctgatgatgatgat
gatgatgatgaaagaactctgggttttgagaaactcattaaacaggatgaactgtgcgtt
gggaaggcctgtccagagcagcatacttcagtagctgatacgaatgtgaaacagaaggtg
atcaaggaagaaaagacaaagtccctgttggagtttgaggaatctgattctcagtttttt
gagtttgaaagtccatttgaaatgttttcagtttggcaagatcagaaaccagacaacaac
agttcagttcaagaggatgaaaaaaattcatgcttgactcgtataggtgataccacaaat
aactggggttatgatacagattatgtgtctggagaggtcattaaaaaagtaacagagggt
gttgaggaacaagcagaaccacagaggagtatttctgttgaggagttttgtgaaattgag
gtaaaaaaacgcaagagaaaacgatatgaaaaacctgtggctgaagatcatctaaggcct
tcttctgtcagaagtaaggaccagtctgatcttaacgagggagagctaactgaagatgat
gtaaaaagcgcagatgtaaggaccacagctcccagttcaagtattcagagacccaccgcg
gcgtccctaaagaagtcccctccaaagcttcgcacttgctccaaacctgttcggaaagtc
ccactttctaaaactcctaggaagacacattccgataccagaaaagggcagaataaaagt
tcaagttacataagctgtcgaacaactcctgctgttgtgccaccaaagaagtttcgccag
tgtccggaaccagcttcaacagttgagaaacttggtctgaaaaaggctcctcgtagggca
tttgagttgtctcagcgatctttagactctatatctcggttacgtgactatggcaaaact
gttggagtagtcgatacccggaaaaaggctaaattaatttctcctcaaactctgtctgtc
agaaataataagaaattgctgacgagtcaagaccttcagttgcgaaggcagatgagaccc
aaattgcaacaaaatagacaaagactccttgactgtgaaagtacagttactccaagagca
ggaccgcacgcagcacaggattctgacacatttgtaccggagtccgataggtcagattat
agtcataaagggggatctgaggtagctgctaacaataatgaaaaacagttaaaatgtgtg
tcttctgaaacagaacccacaaaagcaaaacacgtttctcaggtaactgatgatccttgt
ctcttgaaccagtgcagttctgtagtgtggaatggaagaataccaacgagtgaagtcatt
gtctctacttcagaggaccctttaggtggaggtgacctaacagtacatcgtttagaggtg
gcatctttgaaagagggagagcctgaatccaacagtgatatagagggagatgatatattt
ctaacacagcgtgatcctgaagatatggatttatgttcacaaatggagaaagagaatgat
aacctcattgaagtagttcatggaaaagacacagttcaggtagaagaagtttccaccagt
cggcctcagttggaatctgtgagtagcacaaaatgtaagtataaagattgtgttgaaact
ctgaaaaaccagggtgaatactgctcgaaacactcagaagctaaagcagcagatgaagat
gtatttcgtaaacctgccttgcctctctctgcgtctaaaccttccagaccctccactgct
aagatttttagctcaagtagtacttcacgaattgctcatctttccaagtctttggagaat
acctcagcacttccaccagctctaaaaaagtcaactgggatacagtctgttttgaaagta
ccacagccgacttctctggtgtctcagaagccaatgggtgaagtgaagagtgcatgcaac
atccttcatcctcagactccaaataattccagcaggcaaggttacaaagttccacttggt
gaaagcaaatcttttccggtctcctctccagtaaacatcctgtcatcacagtccgtctct
gacaccttcgttaaagaggtcttaaaatggaagtacaacatgttcgtgaactttgatcag
tatgggcccccgtcaagtctttgtcagtccatcgcaagacgtgtgcctgtcagattccaa
gactgtggagattattttaatgtttttttccctttgatgatattgaatacttttgaaaca
gtggcacaggaatggatcagctctcccaataaagagaaattccatcagttgcaattacga
aaatttcctgctgattataaaaaatactgggagtttgtggtttatcttgaggaatgtgaa
ctagctaaacagcttcatccaaaggaaaatgatttggtgttcttggttcccgaaagacta
aatgaagagaagaaggatctacagagaaactttgtgctggatccccatgaatatcactgt
ggttatgttcataaatttcgccgcacttcagtcatgcgtaatgggaagtctgagtgttcc
gtttccatccagactcaagataacttaccagtcagtttaagtgaattcgtgaaatgtatt
gtaattagctctctagtaacgacacaaaggaagttgaaagccatgtctttgctgagtggt
cggaaccaactggccagagccgttctgaatccaaaccccatggacttctgtacaaaagat
ttactaactacaacatctgagagaattatcgcctacttaagagatttcaacgaagaccaa
aagaaagcaatagaaactgcgtatgccatggtgagacactccccatcggttgccaagatc
tgtctgattcatggaccgcctggcacaggaaaatcaaaaaccattgtcggcctcctgtac
cgcttgctaacagagaggaggggacactcagatgaaaactccaatgccaagatcaaacaa
aaccgtgtccttgtgtgcgcgccttccaatgcagctgttgatgaactcatgaaaaaaatc
atcctcgaattcaaagaaaaatgtaaagacaagaagaatcctttgggaaactgtggagat
ataaatttagtacgtctgggtccagagaagtctattaataatgaggtcctaaaattcagt
ttggacagccaagttaaccaccgaatgaaaaaagagttaccttcccatgttcaggagatg
cacagaaggaaggaatatctagaccgtcagctggatgagctttcccgccggcgtgcgttg
tgccgaggggggcgggaagtacagaggcaagaattagatgaaaaaattgtcgaagtttca
aaagaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgcccacagaaaaca
cagagcatcatcattttggagtcccacatcatctgctgcacgctgagtacgagcggtggt
ttactgctcgagtctgcttttcgtggccaagggggtgtccccttcagttgtgtcattgtc
gatgaggctgggcagtcttgtgaagttgaaacgcttactccgctcatccatcgttgcaac
aagcttatccttgtaggagatcctaaacagctccctcccacagtcatctctatgaaggca
caggagtatggctatgaccagtcgatgatggcccgcttctacaagctgctggaggagagc
gtggagcacaacatggtgggcaggctgcccgtgctgcagctgaccgttcagtacaggatg
catccagacatatgtctcttcccgtctaattatgtttataacagaaacttgaagacaaac
agactgacagagaccaatcggtgttcgtcagactggccatttcagccctacctcgtgttt
gatgttggggatggttcagaaagacgggataatgactcatatgtaaatgttcaagaaata
aaactggtaatggaactaattaaacttattaaagacaaaagaagggatgttactttccga
aacattggcataataacccattacaaggcccagaagacgatgattcagaaggatttggac
aaagagtttgatagaaaagggccagcggaagtcgataccgtggatgcgttccagggtcgt
cagaaagactgtgttattgttacctgtgtcagagcaaatgccatgcagggctcaattgga
ttcctggcaagtttgcagagattgaatgtcaccatcacacgagccaagtacagccttttc
atcctcggacatttgaggaccctgatggaaaatcagcattggaaccacctgattcaggat
gcgcagaagcggggtgccattattaagacttgcgacaaaaactatagacatgatgcaatg
aagatcctgaaactcaagcccgtgctgcagagaagcctgactcaccctcctgccatctcc
ccagaggcatccagaccccagggtggcttgcccagcagcaagctagacagtgagtttgcc
aagacatcttttacttcttctgtatacctctcaccctctgactccaaagaagccactgtt
actgttactgcaaaggaccctgaaaggccatctattcaggaccggcttcgggacccacga
ctgctgaggcggtttggcttgatccctgaagccaaagagcagtgtctcggagagccgcag
ccccccagcccccagcctcctggagcagcgcctccctcgggagagccgggctcccctggc
agccaccagggtccggctggtacagggcagcagtccgccgccaaaggggccactccgagc
aaccacagacctcacgtgcagtgcgaccctccagctgctagtgctgacgctcccacgagt
aaaagaaaatttgaccaggaaggggggctcagccacagaagagagaccagggctttcagt
gaaggggctcaggagaggtgtggctctgggagccatcacccaaagaggaactcgggcttg
gacgagaggggactggaggaggacagtagcttgaagagaaggaggctgctgtag
DBGET
integrated database retrieval system
