Camelus dromedarius (Arabian camel): 105085828
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Entry
105085828 CDS
T04642
Symbol
COL16A1
Name
(RefSeq) collagen alpha-1(XVI) chain isoform X1
KO
K24339
collagen type XVI alpha
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105085828 (COL16A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
105085828
NCBI-ProteinID:
XP_031320437
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All DBs
Position
13:complement(22738921..22789828)
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AA seq
1636 aa
AA seq
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MWASWAPGLWLLSLWVTCSHGADPGEQCLPSQQEGLKLEYRSDLSTNVTGFNLIRRLSLM
KTSAIKKIRNHRGPLILRLGAVSVTQPTRRVFPQGLPSEFALVLTLLLKKHTHQNTWYLF
QVTDGDGYPQISLEVNSQERSLELRARGQDGDFVSCIFSVPQLFDLHWHKLMLSVAGRVA
SVHVDCTSASSRPLGPWRPVQPVGHVFMGLDAEQGKPVSFDLQQAHIYCDPELVLEEGCC
EILPGGCSPETSKARRDTQNNELIEISPQTEGKVYTRCFCLEEPQNSKVDAQLTGRISQK
AERRTKAHQETAADECPPCVQGTQESNVTIGPSGPQGYISSSPQSLEGVKGERGLPGPSG
PKGEKGARGNDCVRISPDAPLQCSEGPKGEKGESGALGPSGLPGSTGQKGQKGEKGDGGI
KGSPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDP
GGPPGPKGDKGSSGVPGKEGPGGKPGKPGVPGLKGEKGDPCEVCPTLPKGFQNFVGLPGK
PGPKGEPGDPAPARDGLGTIGQKGDRGDPGIQGLKGEKGEPCLSCSSAVAAQHLGPSTGA
KGDVGPPGLGLPGLPGKVGAPGPTGLKGEKGNFGEAGPAGSPGPPGPVGPTGIKGEKGEP
CEACLTLSERQDEDSHVVALPGPPGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPG
DPGTPGTIGQPGLSGEPGVRGPAGPKGEKGDGCTACPSLQGALTNMAGLPGKPGPKGDPG
PEGVGRPGKPGQPGLPGVQGPPGLKGLQGEPGPPGVGVPGPQGEPGVQGLPGIQGLRGPR
GPPGPAGEKGAKGSPGVKGATGPVGPPGASVSGPPGPDGQQGQMGLPGARGMPGEKGSQG
EKGEPGECSCPSRGDLVFSGMPGAPGLWMGSSSQPGPQGPPGVPGPPGPPGMPGLQGVPG
NHGLPGQPGLTAELGSLPIEQHLLKSICGDCVQRQKAHPVALLESGEKGDQGIPGVPGLD
SCARCFMERERPRAEEARGDNSEGDPGCAGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPG
PIGPPGFPGAVGSPGLPGLQGERGLRGLTGEKGEPGPPGQPGYPGAMGPPGLPGIKGERG
HLGSPGEKGESGPPGSEGLPGPPGPAGPRGERGPQGNVGEKGDQGFQGQPGFPGPPGPPG
FPGKAGPPGPPGPQAEKGSEGMRGPSGLPGPPGPPGSPGIQGPAGLDGLDGKDGKPGLRG
DPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSSGRPGAEGEPGAMGPQGRPG
PPGHVGPPGPPGQPGPAGISAVGLKGDRGAPGERGLLGLPGQPGTPGHPGPPGEPGVDGA
AGKEGPPGKQGLYGPPGPKGDPGPSGQKGQAGEKGRAGMPGGPGKSGDMGPVGPPGPAGE
RGHPGSPGPAGSPGLPGVPGSMGDMVNYDEIKRFIRQEIIKMFDERMAYYTSRMQFPMEM
VAAPGRPGPPGKDGPPGRPGSPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGFGIA
GEIGPPGPPGPQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPGKAGHCNPSDCFGAMP
MEQQYPPMKNMKGPFG
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcatcgtgggctcctggcttgtggctgctcagtctctgggtcacctgcagccat
ggggcagacccaggggagcagtgcctaccttcacagcaagaaggactcaagttggaatac
agaagtgacttatcgaccaacgtgacaggcttcaatctcatccgccgactcagcctcatg
aagacatctgccatcaagaagattcgaaaccacagggggcctctcatcctgcggctgggc
gcggtctcagtcacccagcccacgcgacgcgtattccctcagggcctccccagtgagttt
gccctggtgctgacgctattgctgaagaaacacacccatcagaacacgtggtatttgttt
caagtgacggatggcgatgggtacccacagatttctctggaagtcaacagccaagagcgg
agcctggagctccgggcccggggccaggatggcgactttgtgtcctgcatcttctcagtg
ccccagctcttcgacctgcattggcacaagctgatgctgagcgtggccggacgtgtggca
tccgtgcatgtggactgcacatcagcctcctcccggcctctggggccctggcgacctgtg
cagcctgtgggccacgtcttcatgggcttggatgctgagcagggcaaacctgtctctttt
gaccttcagcaggcacacatctactgtgacccagagcttgtgctggaggagggctgctgt
gagattttaccaggagggtgttccccagagacctccaaggcccgccgggacacccagaac
aatgagctcatcgagatcagtccgcagactgagggcaaggtctacacccgctgcttctgc
ctagaggagccgcaaaacagcaaggtggatgcccagctgacaggaagaatcagccagaag
gcagaaaggagaacaaaggcccaccaggagacagcagccgatgagtgcccaccctgtgtc
cagggtacccaggagagcaacgtcacaattggcccctctggcccccagggttatatttct
tcctcaccacagtcccttgagggagtgaaaggtgagcgcggcctgcctggtccatcagga
cccaagggagagaagggagcccggggcaatgactgtgttcgaatctccccggatgctccg
cttcagtgctcagaaggcccaaagggagagaagggggagtcaggagccttgggaccctca
ggactcccaggctccacaggccagaagggccagaaaggcgagaagggagatggaggcatc
aagggctcgccgggaaagccaggccgagatggccggccaggagaaatctgtgtcataggg
cccaaagggcagaagggagaccctggctttgttgggcccgaggggctggcaggagagcct
gggccccctggcctccctgggcccccagggataggacttcctgggactccgggggacccg
ggtggcccaccaggccccaagggagacaagggcagctccggggtgccgggaaaggaaggt
cctggcgggaagcctgggaagccaggggtgccggggctgaagggagagaagggtgacccc
tgtgaagtgtgcccaacactgcctaaagggttccagaactttgtggggctccctggaaag
ccagggcccaagggagaaccaggtgatcctgcaccagctagggatggcctgggaactatt
ggacaaaaaggtgatcggggagaccccggcatccaaggcctcaaaggagagaagggggag
ccctgcttgtcctgcagctcagctgtagcggcccagcatcttgggccttctacaggagcc
aaaggagacgtgggccctcctggtctcggtttgcctggccttccggggaaagttggggct
ccagggccaacagggctgaaaggagagaagggtaattttggggaggcagggccagccggc
agtccggggcctccaggaccagtgggacccacaggcatcaaaggggagaagggggagcct
tgtgaggcatgcctcaccctgtctgagcgtcaggatgaggacagccacgtggtggccttg
cctgggcctcctggagagaaaggggagcctgggcctccaggctttgggctgccaggaaaa
cagggcaaggctggagagcgtggactgaaggggcagaagggtgatgctgggaatcctgga
gatcctggaacaccaggcaccatagggcagccgggactgtcgggagagcctggggttcgc
ggccctgcagggccaaaaggagaaaagggtgatggctgcactgcctgccccagcctgcag
ggggcgttgaccaacatggcgggattgcctgggaagccaggcccgaaaggagacccgggg
ccagaaggtgttggccggcctggtaaaccgggccagcctggtctaccaggagttcaaggg
cccccaggactgaaaggcctacagggagagcctgggcctccaggagtgggagtcccgggg
ccccagggggagcctggagtccagggtctgcctggcattcaggggcttcggggacctcgg
ggaccacctggccctgctggagagaagggtgccaagggatctccaggggtgaaaggagcc
actggacctgtgggacctcctggtgccagtgtctctgggcctccgggccctgatgggcag
caaggacagatgggacttccgggagccagagggatgccgggtgaaaaggggtcgcaggga
gagaagggcgagccaggggagtgctcctgtccttcccgaggggaccttgtcttctctggc
atgccgggtgctccgggactttggatgggcagctcctcgcagccgggcccgcagggtcct
ccgggtgttcccggaccaccaggcccccctgggatgcctggactgcagggagtgcctggg
aaccatggtttgccaggacagcctggattaactgcagagctgggatccttgcccattgaa
cagcacctccttaagagcatctgtggggactgtgtccaaaggcagaaggcccaccctgtg
gctctcctagaaagtggagagaagggagaccagggcatccccggcgtgccaggcctcgac
agctgtgcccggtgcttcatggagcgggagcgcccaagagctgaggaggcccggggggac
aacagcgagggagacccgggctgtgcagggagccctggcctgcctggccctccgggactg
cctggccagagaggagaagagggtccacctggcatgaggggctccccgggtcctccaggc
cctattggccccccaggttttcctggtgctgttggctcccccggattgcctggtcttcaa
ggagagcgaggcctcaggggcctgaccggagagaagggggaaccgggtcctccagggcaa
cctggctacccaggtgccatgggccccccgggactgcctggcatcaagggggagcgcggc
cacttgggttccccgggagagaagggagaatcgggcccacctggttctgaaggcctccca
ggacccccaggcccagcgggtccccgaggagagcgaggaccccaagggaacgttggtgag
aaaggcgaccagggatttcaaggccagccaggctttccaggcccaccgggtccccctgga
ttcccaggcaaagctggaccacctggcccacctggcccccaagcggagaagggcagtgaa
gggatgcgaggtccatcaggcctgcctggtccccctgggccaccaggatctcccgggatt
cagggcccggctggtctggatggtctggacgggaaggacggcaagcctggcttgaggggg
gaccccggtcctgctggcccccctggactcatgggacccccgggcttcaaaggcaaaacc
ggacatcccggccttccaggaccgaagggtgactgtggaaagccaggtcccccaggcagc
agtggccggcccggagcagagggtgagcctggtgccatgggaccccagggaagacccggc
cctcctggccatgttgggccgccggggcctccaggccagccaggcccagctgggatctct
gcagtgggcctgaaaggagaccggggagcccctggagagaggggccttttaggtcttcca
ggccagcctggcacccctggacaccctggccctccgggtgaacctggtgtggatggcgca
gctggcaaagagggaccccctggaaaacagggactctacggaccccctggcccaaagggt
gatccaggaccttcaggacagaagggccaggcaggagagaagggaagagctggcatgcct
ggcgggcctggcaagagtggcgacatgggacctgttgggccaccgggtcctgcaggagag
agaggccaccctggatctccggggcctgcagggagccccgggttgcccggggtgcctggc
tccatgggagacatggtgaattatgatgaaatcaagaggttcatcagacaagagatcatt
aaaatgtttgatgagaggatggcttactacacttccaggatgcagttccccatggaaatg
gtggcagctccgggacgaccagggcccccagggaaggatggtcccccgggccgtccaggc
tctccgggatcacctgggctccctggtcagattggcagagaaggacggcagggcttacca
ggagtgagaggattgcctggtaccaaaggtgaaaagggagacattggttttggcattgca
ggagaaattggtccccctgggcccccaggccctcagggtcctcccgggtatggcaagatg
ggagccactgggccgatgggccagcaaggcattcctggcatccccggtcccccgggcccc
atgggccagccgggcaaggccggccactgtaacccctcggactgctttggggccatgcca
atggagcagcagtacccacccatgaaaaacatgaaggggccttttggctga
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