Camelus dromedarius (Arabian camel): 105086373
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Entry
105086373 CDS
T04642
Symbol
SMARCC2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03082
ATP-dependent chromatin remodeling
cdk04714
Thermogenesis
cdk05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105086373 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105086373 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105086373 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdk03021
]
105086373 (SMARCC2)
03036 Chromosome and associated proteins [BR:
cdk03036
]
105086373 (SMARCC2)
Transcription machinery [BR:
cdk03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105086373 (SMARCC2)
Chromosome and associated proteins [BR:
cdk03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105086373 (SMARCC2)
PBAF complex
105086373 (SMARCC2)
GBAF(ncBAF) complex
105086373 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
105086373
NCBI-ProteinID:
XP_031319512
LinkDB
All DBs
Position
12:complement(6781963..6800922)
Genome browser
AA seq
1152 aa
AA seq
DB search
MAVRKKDGXPNVKYYEAADTXAQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCSEIEPKLLGKLKDIIKRHQGTVTEDKNSASHVVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
CSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKELREGVGTVEEEAKEKTSEAPKKDDEKGKEGDSEKE
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESDGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPLPAAGAAGPPSVHGLAMA
PASVAPAPASSGAPPGSLGPTEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAP
SPGTVTPVPPPQ
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcngccccaacgtgaagtactacgaggctgcggacacc
nntgcccagttcgacaacgtgcgactctggctcggcaagaactacaagaagtatatacaa
gctgaaccacctaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcagggggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgctcagaaattgaacccaaactgttagggaaattaaaagacattatc
aagagacatcagggaacagtcactgaggataagaacagcgcctcccatgttgtgtgtcct
gtcccggggaacctggaggaagaggaatgggtgcggccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttatgacacgtggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggatcctggacacagacaccttcaatgaatggatgaacgaggaagactacgaagtaaat
gatgacaaaaaccccgtctcccgccgaaagaagatttcagccaagacactgaccgatgag
gtgaacagcccagattcagatcgacgggacaagaagggggggaactataagaagaggaag
tgctccccatctccttcaccgaccccagaagccaagaagaagaatgctaagaaaggtccc
tcaacaccttacaccaagtcaaagcgtggccaccgggaagaggagcaggaagacttgaca
aaggacatggatgagccctcaccggtccccaatgtggaagaggtgacactgcccaaaaca
gtcaacactaagaaggactcagagtcagccccagtcaaaggaggcaccatgactgacctg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaagatgagaacagcaca
gggaacaagggggagcagaccaagaacccagacctgcacgaggacaacgtaactgagcag
acccatcacatcatcatccccagctatgctgcctggtttgactataacagtgttcatgcc
atagagcggagagcgctccccgagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcctatcgaaacttcatgatcgacacttaccggctgaacccgcaggagtat
ctcacatccactgcctgccgcaggaacctggcgggcgatgtctgcgccatcatgagagtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccaatggggcctccacccacctctcacttccacgtcctggcggacacaccatcaggg
ctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaaacca
acagatatgcagaacttcgggctgcgcacagacatgtacacgaagaagaacgtaccctcc
aagagcaaagctgcggccagtgccactcgagagtggacagaacaggagaccttgctactc
ctggaggcactggaaatgtacaaagatgactggaacaaagtatcagagcacgtgggaagc
cgcacgcaggacgagtgcatcttgcattttcttcggcttcccattgaagacccatacctg
gaagactcggaggcctccctgggccccctggcctaccagcccatccccttcagccagtcg
ggcaacccagtgatgagcaccgttgctttcctggcctctgttgttgatcctcgagtggct
tctgctgccgcgaagtcagccctagaagaattctccaaaatgaaggaagaggttcccaca
gccttggtggaggcccacgttcggaaagtggaagaagcagccaaagtgacaggcaaggcg
gacccagcctttggtctagaaagcagtggcattgcaggaaccacttctgatgagcctgag
cggatcgaggagagcgggactgacgaggcacgggcggagggccaggccacggaggagaag
aaggagcccaaggagctgcgagaaggagttgggactgtagaggaagaagcaaaggagaag
accagcgaggcacccaagaaggatgatgagaaaggcaaggaaggcgacagcgagaaggag
tcagagaagagtgatggggacccaatagttgatccggagaaagagaaggagcccaaggaa
gggcaggaggaagtgctgaaggaagtggtggagtcggacggggagaggaagacgaaggtg
gagcgcgacatcggcgagggcaacctgtccactgccgccgctgccgccctggccgctgct
gccgtgaaggccaagcacctggctgccgtggaggagaggaagatcaaatctctggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaactccggcactttgaggagcta
gagaccatcatggaccgggagcgagaagcgctggagtaccagaggcagcagctcctggct
gacagacaagccttccacatggagcagctgaagtatgcggagatgcgggctcggcagcag
cacttccagcagatgcaccagcagcagcagcagccaccgccggccctgcccccgggctcc
cagcccctcccagctgcaggcgctgctgggccgcccagcgtccacggcttggctatggct
ccggcctctgtggcccctgctcctgccagcagtggggcccctcctggaagcttgggcccc
actgaacagattgggcaggcagggtcaactgcagggccacagcagcagcagccagctgga
gccccccagcctggggcagtcccaccaggggtacccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcggcccagagccctgccattgtggcagctgttcagggcaacctcctg
cccagtgccagcccactgccagacccaggcacccccctgcctccagaccccacggccccg
agcccaggcacggttacccctgtgccacccccacagtga
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