Camelus dromedarius (Arabian camel): 105086450
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Entry
105086450 CDS
T04642
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X2
KO
K12385
Niemann-Pick C1 protein
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
cdk04142
Lysosome
cdk04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
105086450 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105086450 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
105086450 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdk02000
]
105086450 (NPC1)
Transporters [BR:
cdk02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
105086450 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
105086450
NCBI-ProteinID:
XP_010975257
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All DBs
Position
24:15389689..15428821
Genome browser
AA seq
1277 aa
AA seq
DB search
MSARGPALGLLLLLLFPAEVSAQSCVWYGECGIASGDKRYNCRYSGPPKPLPEDGYDLVQ
ELCPGFFFGNVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELQYYVGESFANAMYNACRDVEAPSSNDKALGLLCGRE
AEACNATNWIEYMFNKDNGQAPFTITPIFSDLPTQGMEPMNNATKGCDESVDEVTGPCSC
QDCSLVCGPKPQPPPSPAPWRILGLDAMYVIMWSTYMAFLVVFFGAFFAVWCYRKRYFVS
EYTPIDGNIAFSVNASDRGEASCCDPLGAAFEGCLRRLFAQWGSFCVRHPGCVVFLSLAF
IAACSSGLAFVRVTTDPVDLWSAPGSQARREKEYFDAHFGPFFRTEQLIIQAPHSHPHTY
EPYPSGSDVPFGPPLAVDILHQVLDLQTAIENITASYNNETVTLQDICVAPLSPYNKNCT
ILSVLNYFQNSHSVLNHEVGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWETAFINFVKNYKNPNLT
ISFKAERSIEDELNRESNGDVVTILISYAVMFLYISIALGHIKSWRRLLVDSKISLGVAG
VLMVLSSVACSLGIFSYAGVPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGETL
DQQLGRVLGEVAPSMFLSSFSETVAFFLGGLSTMPAVHTFSLFAGMAVFIDFLLQMTCFV
SLLGLDIKRQEKNRLDVLCCVGGPADGGSIQASESCLFRFFRDSYSPLLLKDWMRPIVIA
VFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVMDYFQSLSQYLHAGPPVYFVLEEGHDYT
SLRGQNMVCGGTGCDNDSLVQQIFTAAQLDNYTRIGFAPSSWIDDYFDWIKPQSSCCRVY
NSTDQFCNASVVDPACVRCRPLTPEGKQRPQGRDFMRFLPMFLSDNPNPKCGKGGHAAYS
TAVNLLGNGTGVGATYFMTYHTVLQTSADFIDAMKKARLIAGNITRTMGLEGSGHRVFPY
SVFYVFYEQYLTVVDDTVFNLGVSLGAIFLVTVVLLGFELWSAVIVCVTIAMILVSMFGV
MWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEAALSHMGSSVFSG
ITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNRAKSL
ATQERYKGTEREQLLNF
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcggccccgccctcggcctcctcctgctgctcctcttcccggcggaggta
tctgcacagtcctgcgtttggtatggagagtgtggaattgcatctggagataagagatac
aattgcagatactctgggccgccaaaaccgctgccagaggacgggtatgacctcgtgcag
gagctctgcccaggcttcttcttcggcaacgtcagcctttgttgtgatgtccagcagctt
cggactctgaaagacaacctgcaactgcctctgcagtttctgtccaggtgtccatcctgt
ttttataacctaatgaacctgttttgtgagctgacatgtagccctcgacaaagtcagttt
ctgaatgtcacagcaactgaagattatgttgatcctgttacaaaccagacaaaaacaaac
gtgaaagaattacaatactatgttggagagagttttgccaatgcgatgtacaatgcctgc
agggacgtggaggccccctcgagtaacgacaaggccctgggcctgctgtgcgggagggag
gccgaagcctgcaacgccaccaactggatcgagtacatgttcaacaaggacaacggccag
gctcctttcaccatcacacccatcttttcagatcttccaacccaggggatggagcccatg
aacaatgccaccaagggctgtgacgagtctgtggatgaggtcacggggccatgcagctgc
caggactgctcactggtgtgtggccccaagccccagcccccgccctctcctgctccctgg
agaatcctgggcctggatgccatgtacgtcatcatgtggagcacctacatggccttcttg
gttgtgttttttggagcattttttgccgtgtggtgctacaggaaacggtattttgtctcc
gagtacacccccattgatggcaatatagctttctctgtaaatgccagtgacagaggggag
gcgtcctgctgcgaccctctgggggccgcgtttgagggctgcctgaggcggctcttcgcg
cagtggggctccttctgcgtccgccaccccggctgcgtcgtgttcctgtcgctggccttc
atcgccgcctgttcgtcgggcctggctttcgtgcgggtcaccaccgacccggtggacctg
tggtcggcccccggcagccaggcgcgccgggagaaggagtacttcgacgcgcacttcggg
cctttcttccgcacggagcagctcatcatccaggccccgcacagccacccgcacacctac
gagccttacccctcggggtccgacgtgccctttgggcccccgcttgccgtagacatttta
caccaggttcttgacttacaaacagccatcgaaaacattactgcgtcttacaacaacgag
accgtgacgcttcaggacatctgcgtggcccccctctcgccatataacaagaactgcacc
attcttagtgtgttaaattacttccagaacagccactctgtgctgaaccacgaagtaggg
gatgacttcttcgtgtatgcagattaccacacgcacttcctgtactgtgtccgggctcct
gcctctctgaatgacacaagtttgctgcacgatccttgcctggggacgtttggtgggccg
gtgttcccgtggctcgtgttaggaggctatgatgatcaaaactacaataacgccacagcc
cttgtgattacctttcctgtcaataattactataacgacacagagaagctgcagagggcg
caggcctgggaaacagcgtttattaactttgtgaaaaactacaagaatccaaatctgacc
atttcttttaaggctgagcgaagtattgaagatgagctaaatcgtgaaagtaacggtgac
gttgtcactattctaatcagctatgccgtcatgtttttatatatttccatagccttgggg
catatcaaaagctggcgcaggcttctggtggactctaaaatctcgctgggcgtcgcgggt
gtcctgatggtgctgagctcggtggcgtgctccttgggcatcttcagctacgctggggtc
cccctgaccctcattgtgatagaggtcatccctttcttggtgctggccgttggggtggac
aacatcttcattctggtccagacctaccagagagatgaacgtcttcaaggggaaaccctg
gaccagcagctgggcagggtcctaggggaggtggctccgagtatgttcctgtcgtccttc
tcagagacggtagcgtttttcttagggggcctgtccacgatgccggccgtgcacaccttc
tccctgtttgcggggatggcggttttcatcgacttcctcctgcagatgacctgttttgtg
agtctcttggggttggacattaagcgtcaggagaagaaccggctggacgtcctctgctgt
gtgggagggcccgcggacgggggcagcatccaggcctcggagagctgcctgttccgcttc
ttcagagactcctattctccacttctgctcaaggactggatgcggccgattgtgatagca
gtatttgtgggtgtcctgtcgttcagtatcgcagtcctgaacaaagtggaaatcggattg
gatcagtctctttcaatgccagatgactcctacgtgatggattatttccagtccctcagt
cagtacctgcacgccggcccacccgtgtactttgtcctggaggaagggcacgactacacg
tctctgcgcgggcagaacatggtgtgtgggggcaccggctgcgacaacgactccctggtg
cagcagatcttcactgccgctcagctggacaactatacccgaataggctttgcgccctcg
tcctggatcgacgactactttgactggattaagccccagtcgtcttgctgtagagtctac
aacagcacggatcagttctgcaacgcgtcagtggttgaccctgcctgtgtccgctgccgg
cctctgactccagagggcaaacagaggcctcagggcagagacttcatgcgattcctgccc
atgttcctttctgataacccgaaccccaagtgcggcaaagggggacacgccgcctacagc
acagctgttaacctcctcggcaacggcacgggcgtcggagccacctacttcatgacctac
cacaccgtgctgcagacctccgctgacttcatcgacgccatgaagaaagcccgcctcatc
gccggcaacatcaccaggaccatgggcctcgaaggaagtggtcaccgtgtgttcccttac
agtgtgttctacgtcttctatgaacagtacctgacggtggtcgatgacacggtctttaac
ctcggcgtgtccctgggagccatctttctggtgactgtggttctcctgggctttgagctg
tggtcggcggtgatcgtgtgcgtcaccatcgccatgatcctggtcagcatgtttggcgtc
atgtggctgtggggcatcagtctgaacgcggtttctttggtcaacttggttatgagctgc
ggcatctccgtggagttctgcagccacataaccagagcgttcacggtcagcaccaagggc
agccgcgtggagcgggcggaggctgcgctctcccacatgggcagctcggtattcagcgga
atcacactaacaaaatttggaggcattgtggtgttggccttcgccaaatctcaaattttc
cagatattttacttcaggatgtatttagctatggtcttactgggagccactcatgggtta
atattcctccctgtcttactcagttacataggaccatcagtaaacagagccaaaagttta
gcgacgcaagagcgatacaaaggcacagagcgagagcagctcctcaacttctag
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