| Entry |
|
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| Symbol |
VPS13A
|
|---|
| Name |
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
|
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| KO |
| K19525 | vacuolar protein sorting-associated protein 13A/C |
|
|---|
| Organism |
cdk Camelus dromedarius (Arabian camel)
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|---|
| Brite |
KEGG Orthology (KO) [BR:cdk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:cdk04131]
105087411 (VPS13A)
Membrane trafficking [BR:cdk04131]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
105087411 (VPS13A)
|
|---|
| SSDB |
|
|---|
| Motif |
|
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| Other DBs |
|
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| LinkDB |
|
|---|
| Position |
4:29884445..30086089
|
|---|
| AA seq |
3169 aa
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKIKVG
HIGNLNLKIPWKNLYTQPVEAVLEDIYLLIVPSSIIKYDPLKEEKQLLEAKQQELKRIEE
AKRKVADQEKQRVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITDRENPLSFGISLQ
NLSMQTTDQYWVPCLHDETEKLFRKLIRLDNLFAYWNVKSQMFYLNNYDESLNSLRNGIV
DENIVPEGYNFVFRPISANAKLQMNRRSDFDFSAPKINLDVELHDIAIEFNKPQYFSLME
LLESVDMMTQNLPYRKFKPDVPLHYHAKEWWVYAIHGILEVNVWPRLRMWSWKHIREHRQ
KVKQYKELYKRKLTSKKPSGELLSSLEELEKTLDVFNITIARQQAEVEAKKSGYRIYREG
ANESEDNKGWFSWLWNWSESHTKQQPDVKPGSLEEMLTPEEKTLLYEAIGYSETAVDPTL
PKTFEAIKFFVHLKSMSIILREKQQKSELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDSASLFQIIFEINPLDETAAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLKINLKASYIILPQD
GVFSPTSSLLILDLGHLKVTSKIRSELPDLKQGGPKLEEIMDRAYDSFEIQLTSIQLLYS
RVGDNWKEARKLNVSAQHILVPMHFNVELSKAMVFMDIRMPRFKIFGNLPLISLRISDKK
LQGILELIESIPKPPPATEVSAPVKPFQMERSTSLGTSQISQKMFPLLEIPCVDDDSEEE
FFDAVCSPLEEPLQSPTGVESPQQKKPYCSKNMIEYKIRFEVPEVLIQFCQLVGDCELPV
VEINVLGLGTDIELRTFDLKANAFLKEVCLKCPEYLDENMKPVYLITTLDNTMEDLLTLE
YVKAEKNLPNLKSTYDNVVQLIKVNFSSLDIHLHTEALLNTINYFNNTLPQLEEKSAPIH
VAETEDKGEVIKKIPLKLSKNEDIITLQILAELSCLRIFIQDQKHNISEIKIEGLDSEMI
MRPSVTEINAKLRNIIVLDSDINAVYKKAVYITGKEVFSFKMISYMGATAGSAYTDMNAV
DVQVNLTVGCIEVVFVTKFLCSILAFIDNFQAGKQALAEATVQAAGRAATGVKELAQRSS
RMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHVITDSQTNPPPIIDLITVKLS
EMRLYRTQFINDAYQDVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAHLKPMEFILSQ
EDITIIFKTLYGNIWYEDGGSASNAGIKDQSSVTSGITHASHRTGGTTVVTAAVVEVHSR
PSQIKTTLNMSFKTDYLTMALYSPGPKQTSFTDIRDPSLNLAEFKLENIISTLKMYTDDS
TFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVRYRKVRDGWVADLVLQEMY
ICASVEFLLTVANVFLEAYTTGTAVETNVQTWPAKEEVPIQESEKWEINVLIKNPEIVFV
ADMTRNDAPALVITTQCEICWKGDFENNTMTAAIKDLQVRACPFLPVKRKGKITTVLQPC
DLFCQATQISTDPQVIDLSVKSLTLKVSPVIINTVITITSALYTAKETIPQETAASTAHL
WEKKDTKNLKMWFLEEPDEAEKIAPTTELVPKGEMIRMNIDSIFIVLEAGIGHRTVPMLL
AKSHFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGIKM
KKKAKKAIVESGTEEENYKVPEYKTVITIHSKDQLNITLSKCGLVMLNNLVKAFTEAATR
SSAVFIRDLAPFMILNSLGLNISVSPSESFSVLSVPMAKSYVLKSEESLSMDYVRTKDND
HFNAMTSLSSKLFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDAVEG
SKKVTIRSPVQIRNHFSIPLYVYGGDALLGTASPGNEFNIPLASYRSLLSLKPEDEDYQM
CEGIDFEEIMKNDGTFLKKKCRAINPSKKPFIINIVPEKDNLTSVSVYSEDGWDLPYIMH
LWPPILLRNLLPYKIAYYIEGIESRVFTLHEGRSSQICTVQSDKARLHLKLLDYLNHDWK
SVYHIKPNQQDISFISFTCVTELEKTDLDIAIHVTYNIGQTVIAFHSPYWMVNKTGRMLQ
YKADGIHRKHPPDYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAVKCK
GPKMEYQVGVTIDLSSFNITRIVTFTPLFLIENKSKYRISVAEEGSDKWLSVDLEQCIPF
WPEDASSKLLIQVERSEGPPKKIYFNKQESCILLRLDNELGGIIAEVNLAEHSTVIKFSD
YHDGAAPFLLINHTKNDIVQYKQSSLSKIEDSLPPGKAVFYTWADPAGSRMLKWECGKSY
GEVTQKDDMMTPVSLGKKTIYLVSFFEGLQRIILFTEDPRVFRVAYESEKAELAEQEIVL
ALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKQTEKLEKEFKEYTE
SSPSEDKVIELDTNVQVCFTPSGTNMKIMQPHVTAIRRNYLPALKVEYSTSAHQSSFRIQ
IYRIQIQNQIPGAVFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKV
LIQEMDLRLDLGFVYAVAELMTEAEVTEKTEVELFHKDIEAFQEEYKIVSLVDSSQVSLY
EYFHISPIKLHLSVSLSSGGEEAKDSEQHGGQMAVHSINLLLKSIGATLTDVQDVVFKLA
FFELNYQFHTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE
PYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRR
EAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGIVGAV
TRPTGGIIDMASSTFQGIKRATESSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQVM
ENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYTFDEFTKEPFIIHG
RRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILRKLEEAREPSPSL |
|---|
| NT seq |
9510 nt +upstreamnt +downstreamnt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcacgctgggcatctggggaggagctgtggccctcaagaat
cttgaaattaaagaaaatgctctgagtcagctggatgtaccatttaaaattaaagttggt
catataggtaatcttaatcttaaaattccatggaaaaacctttatactcaaccagttgaa
gccgtattggaagacatttatttactcatagtaccttcttctataataaaatatgatcct
ttaaaagaagaaaaacaactcttagaagcaaagcaacaggaactgaaaagaatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacagcgggtggagaaacaggacacttttaca
gagaaattaattactcagataataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttatgaagatgatatcacagatcgagagaacccactgtcatttggtatttccctccag
aatctcagcatgcagacaactgatcaatactgggttccatgtttacatgatgaaactgag
aagctatttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagatgttttatcttaataattatgatgaatcattgaacagcctgaggaatggcattgtt
gatgaaaatattgttccagaaggttacaattttgtatttcgccccatatctgctaatgcc
aaacttcagatgaatcgccgatcggattttgacttttctgcccccaaaataaacctggat
gttgagttacatgacatagcaattgaatttaataaaccacagtatttcagtcttatggag
cttcttgaatcagttgatatgatgacgcaaaatctaccatataggaaattcaaacctgat
gtacctcttcattaccatgccaaagaatggtgggtttatgctatacatggtattcttgaa
gtaaatgtttggccccgtttacggatgtggtcatggaagcatattagagaacataggcaa
aaagtgaagcagtacaaagaactgtataaaagaaagctaacaagtaagaagccgtctggt
gaactgctcagctctttggaggagttggaaaagactttggatgtatttaatataactata
gcaagacaacaggcagaagttgaggcaaagaaatctggatacaggatttacagagaagga
gcaaatgagtcagaagataataaaggatggtttagctggctgtggaattggtcagaatca
catactaaacaacaaccagatgttaaacctggaagtcttgaagaaatgttgacacctgaa
gaaaaaactttactatatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatcaagttttttgttcacttgaaaagtatgtctattattctg
agagaaaaacaacaaaaatctgagctgttagatattgtagtggaagaattcagcacgttg
attgtgcaaagaccaggagcacaagcaattaaatttgagaccaaaatagattcgtttcat
gttactggcttaccagataattcgacaaaaccccgcctcctgtcttcattggatgattct
gcatcactcttccaaattatatttgagataaatccattagatgaaactgctgctcagagg
tgtatcatagaagctgaacctttagaaatgctatatgatgcaagaactgtgaatagtata
gtggaattcttcagacctccaaaggaagtaaatctagcacagctgacttcagcgactttg
acaaaacttgaagaattccgtgataagacagcgacaggtctgttatacattatcgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcttcatatattatactcccacaagat
ggagtttttagccctacatccagtctacttattttggatcttggtcatctaaaggtgaca
agtaaaattcgttcagaattaccagatttaaaacaaggtggccccaaacttgaagagata
atggatagagcttatgattcctttgaaattcagcttacaagcatacagctgctttacagc
agagttggtgataattggaaagaagcacgaaaactcaatgtatctgcacaacatattttg
gtacctatgcacttcaatgtggaactctctaaggccatggttttcatggatataaggatg
cccagattcaagatttttgggaacttaccactgatttctttaagaatctcagataaaaaa
ctgcaggggattttggaattgattgaaagcatcccaaaacccccacctgcaactgaagtc
agtgcccctgtgaagccatttcagatggaaagatccacttctttaggaacatcccagatt
tcacagaaaatgtttcctctcttggaaattccgtgtgttgatgatgattcagaggaggag
ttttttgatgcagtatgtagtcccttggaagagcctcttcaatctccaactggagttgaa
agtcctcaacagaaaaagccatactgttcaaaaaatatgattgagtataaaataagattt
gaagtgccagaggttttgattcaattttgtcaacttgttggagattgtgaactacctgtg
gtagaaattaatgtcttaggattgggcacagacattgagcttagaacatttgatttgaaa
gcaaatgcctttttgaaagaggtctgcttaaaatgccccgaatacttagatgaaaatatg
aaaccggtttatttgattacaacactggataacacaatggaagatctgttaacactggaa
tatgtgaaggctgaaaagaatttacccaacttgaaaagtacctatgacaatgtcgtgcag
ctgattaaggtgaatttttcgtctttggatattcatttacatactgaagcacttctgaat
acaataaattattttaataatacccttccacaattggaggaaaaatcagccccaatacac
gttgcggagaccgaagacaaaggagaggttattaaaaaaatacctttaaaactatccaag
aatgaagatattattactttgcagattttagcagagttatcgtgtttacggatatttatt
caagatcagaaacataacatttcagaaattaagattgaagggcttgattctgagatgatt
atgaggccttcagtgactgaaataaatgcaaagctaaggaatataattgttttggattct
gatataaatgctgtatacaaaaaggctgtttatataactggaaaagaagttttcagcttc
aaaatgatttcttacatgggtgcgactgctggttctgcatacacagatatgaatgcggtt
gacgttcaagttaatttaaccgttggttgcattgaagtagttttcgtcacaaaatttcta
tgttctatactggcttttatagataattttcaagcaggtaaacaagccttggctgaggca
actgttcaggcagcaggaagggctgctactggtgtaaaagaactggcacaaaggagctct
agaatggcattggatgttaacatcaaagccccagttgtggttatcccacagtctccagtt
tctgaaaatgtttttgttgctgattttgggctaattacgatgacaaatacattccatgtg
ataacagacagccagaccaaccccccgcccattattgatttgataacagtaaagctgagt
gaaatgcgactatacaggactcaatttattaatgatgcataccaggatgtactggatctt
ctactgccattaaatcttgaggtgattgttgagcgaaatttatcctgggagtggtatcaa
gaagttccttgttttaatgtaaatgctcatctaaagcccatggagttcattcttagtcaa
gaagatataacaattatttttaaaacattatatggcaatatatggtatgaagatggtggt
agtgcctcaaatgcaggaataaaagatcagtctagtgttactagtggaattactcatgct
tcacaccgtacaggaggaacaactgtagtgacagctgctgtggtggaagtacattcacgt
ccttctcaaattaagacaacactaaatatgagtttcaaaactgattatcttaccatggca
ctgtatagtccgggtcctaaacagacttccttcacagatattcgtgatccttctctgaat
cttgctgaatttaagttggagaatattataagtactttaaaaatgtatacagatgactca
acgttttcttccttctcattaaagaactgtattttagatgacaaaaggcctcatgtcaag
aaggcgactcctagaatgataggactgacagttgggtttgacaaaaaggacatgatggat
gtacggtataggaaagtcagagacggatgggtggctgatttagtccttcaagaaatgtat
atttgtgcaagtgtggaatttctcctgaccgttgcaaatgtctttcttgaggcctacacc
acaggcactgctgtagaaaccaatgttcaaacatggcctgctaaagaagaagtgcctata
caggaatcagagaagtgggaaattaatgtccttattaaaaatcctgaaattgtgtttgtg
gctgatatgacaagaaatgatgctcctgccttagtcattacaacacagtgtgaaatttgt
tggaaaggtgactttgaaaataatacaatgactgctgccattaaagatctccaagtcaga
gcatgcccatttcttccagtcaagagaaaaggaaaaatcactactgttttgcagccctgt
gacttattctgtcaagctactcagataagtacagatccacaggtgattgatttatcagta
aaatcactgacactgaaggtttcaccagttatcataaatactgtgatcaccataacttca
gcactttatacagctaaggaaaccatcccacaagaaactgctgcttctacagcacattta
tgggaaaagaaagatacaaagaatttgaaaatgtggtttcttgaagaaccagatgaagct
gaaaaaatagctcccacaactgaattggtacccaaaggagagatgataagaatgaacatt
gattctatttttatagttcttgaggctggaattggtcatagaaccgtgcctatgctttta
gcaaaatcacatttctcaggggaaggcaaaaactggagttctctaataaatctccactgt
cagcttgagctcgaagtacattattacaatgaaatgtttggtgtatgggagcctttgctt
gaacccttagaaattgatcagactgaggattttagaccatggaatcttggaatcaagatg
aaaaagaaagccaaaaaggccattgttgagtcaggtactgaagaagaaaattataaggtg
ccagaatataaaactgtcatcactatccattcaaaagaccaactaaacattacattatcc
aaatgtggccttgtaatgttaaataacttagtcaaggcatttacggaagctgccactcga
tcttcagctgtcttcataagggatctagcaccatttatgattttaaactctcttggactt
aatatctctgtttcgccaagtgaatcttttagcgtactcagcgtacctatggcaaaatca
tacgtgttgaaaagcgaggagagtttaagtatggattatgtccgaactaaagacaatgat
catttcaatgcaatgacgagcctaagcagcaaactcttcttcattcttcttacacctgct
aaccactctactgctgataaaatccctttaacaaaagtgggacgacgactgtacactgta
agacacagagagtctggagttgaaagatctattgtttgtcaaattgatgcagtggaagga
agtaagaaggtaacaattcgctcccctgtgcagattagaaatcatttttcaataccactt
tatgtttatggaggggacgccttactgggaacggcttcacctggaaatgaatttaacata
ccattagcgtcctaccgatcactcctttctctgaagccagaagatgaagactatcaaatg
tgtgaaggaattgactttgaagaaattatgaaaaatgatggcacttttctaaagaagaaa
tgtagagctataaacccttctaaaaagccattcatcattaatattgtcccagaaaaagat
aacttgacatctgtgtcagtgtattccgaagatggttgggatttaccatacataatgcat
ttgtggccacctatcctactccgaaatcttcttccttacaaaattgcctattacatagag
gggattgaaagtagagtttttactctacatgaaggccgctcatcccagatttgtactgta
cagtcagataaagccaggctgcatttaaaattacttgactatcttaatcatgattggaaa
agtgtatatcatataaaacctaatcaacaagatattagtttcatcagttttacttgtgtc
acagaactagaaaagactgatttagatattgctatccatgtgacttataatattggccag
acagtgatagcatttcatagtccctattggatggtcaataaaactggtcgaatgttacag
tacaaagcagatggaattcatcgaaagcatccacctgattataaaaagccagttctcttt
tcttttcagccaaagcacttttttaataacaataaggttcagcttatggtaaccgatagt
gaattgtcagatcagttttcaattgatactgttggtagtcatggagctgttaaatgtaaa
ggcccgaaaatggaatatcaagttggtgtcactatagaccttagcagttttaacattacc
agaattgtcacatttacccctctttttttaattgaaaacaaaagcaaatatcggatatca
gtggctgaagagggaagtgataaatggctctctgttgatttggagcagtgtatccccttt
tggcctgaggatgcttctagtaaacttcttattcaagttgaaagaagtgaaggccctccc
aaaaagatatattttaacaagcaagaaagttgtattttattgcgtctagataatgagctt
ggaggtattatagcagaggttaatttggctgagcattctacagttattaaattttcagat
tatcatgatggcgcagctccatttctgttaataaatcacaccaagaatgacattgttcag
tacaagcaaagttctcttagtaaaatagaagattctctccctcctggaaaagcagtattt
tatacgtgggctgatcctgcgggctctagaatgctgaaatgggaatgtggaaaaagctac
ggtgaagtaacacaaaaggatgatatgatgacacctgtaagtttggggaaaaagaccatt
tatttagtttcattctttgaaggcttacaacgcattattttattcactgaagatccaaga
gtatttagagtggcatatgaaagtgagaaagcagagttagcagagcaagaaattgtgttg
gcgttacaagatgttggaatttctctcgtcaataattatacaaagcaagaagttgcctat
attggcattacaagttctgatgtggtctgggagacaaagcccaagaagaaggcaagatgg
aagccaatgagtgtaaagcagactgagaagttagagaaagaatttaaggaatatactgaa
tcttccccttcagaagataaggttattgaattggacactaacgttcaggtctgcttcaca
cctagtggtactaacatgaaaattatgcaaccacatgtaacagctatacgaagaaattat
cttcctgctttaaaggtggaatatagcacatctgcacatcaatcgtcatttagaattcaa
atttacagaatacagatccaaaaccagatacctggtgctgtatttccatttgtgttttat
cccattaagcctcccaagtcggtcaccatggattcagcaccaaagccctttacagatgtc
agtattgtcatgagatctgcagggcattcccagatatcacgtattaagtatttcaaagtg
ttgatccaagaaatggatctcagattagatcttggctttgtctatgctgtagcagaactt
atgacagaggctgaagtgactgaaaaaacagaggttgagctttttcataaagatatagaa
gctttccaagaagaatataaaatagtttcattagtagattcatcacaagtcagtctatat
gagtattttcacatatctcctatcaagttgcatttaagtgtttcgctgagttcgggtgga
gaagaagctaaagattcagaacaacatggaggacagatggcagttcattctataaatctt
ttgctgaagagtattggtgccactcttacagatgtacaagatgtagtttttaagcttgca
ttttttgaactcaactatcagttccatacgacatctgaactacagtctgaagtaataaga
cactattcaaagcaggccattaagcagatgtatgtactcattcttggacttgatgttttg
ggaaatccctttggcttgattagagaattttctgaaggtgtagaggcatttttttatgaa
ccttaccagggagccatccagggtcctgaagagtttgtggagggaatggcactaggactg
aaagcactagttggtggagctgttggtggattagctggtgctgcctccaaaatcaccagt
gctatggctaaaggggtagcagctatgactatggatgaagactaccaacagaagagaaga
gaagccatgaacaagcaaccagctggtcttagagaaggcatcactcgtggaggaaaaggc
ttagtgtctggttttgtaagtggcataacaggaattgttacaaaaccaatcaaaggagct
cagaaagaaggagcagctggtttctttaaaggtgttgggaaaggtatagttggagcagtg
acaaggccaactggaggcatcatagacatggctagcagtacatttcagggaataaaaaga
gctacagagagctctgatgaagtagagagtctgcgaccccctaggttctttaatgaagat
ggagttatcagaccttacaggctgagggatggcactggaaatcagatgttacaggtcatg
gaaaatggaagatttgcaaaatacaaatattttacccatgtcatgattaataaaacagat
atgttaatgataaccaaaagtggcgtgttgtttgtaacaaaaggaacatttggacagctt
acttgtgagtggcagtatacttttgatgagtttaccaaagaaccgttcattattcatggg
agaagattacgcattgaagcaaaggaacgagtgaagtctgtattccatgccaaagagttt
ggaaaaataattaacttcaagaccccagaggatgctaggtggatcctcagaaagctagaa
gaagcaagggaaccttccccgagcctctga |
|---|
