Camelus dromedarius (Arabian camel): 105087498
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Entry
105087498 CDS
T04642
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105087498 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdk03041
]
105087498 (DHX16)
Enzymes [BR:
cdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105087498 (DHX16)
Spliceosome [BR:
cdk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105087498 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
105087498 (DHX16)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
SecA_DEAD
nSTAND3
Flavi_DEAD
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
105087498
NCBI-ProteinID:
XP_010976476
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All DBs
Position
20:22862463..22876367
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AA seq
1108 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYRLLEDSEESSEETVGRTRSSLQK
KRKKRKHLRKKRQEEEEEEEEEEVSEKGKRKAGGSKQQTEKPESEDEWERTERERLQDLE
ERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLA
KREREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATN
RYHMPEETRGQVKPGDHHFIPSPQAEGREGFKDLGGALAGPLLVLPFAVGRVVTGKGTLG
GEGNFHLHSPLSAQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKY
QLVLEEEETIEFVRATQLQGDEEPSALPAPTQAQQKESIQAVRRSLPVFPFREELVAAIA
NHQVLIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAMSVAARVAREMGVKL
GNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILF
GLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLE
ACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPS
DMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTP
CSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIH
DLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEK
YGCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGY
SSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTAR
LTRSGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAP
HYYKAKELEDPHAKKMPKKIGKTREELR
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcggggctggagcgctgggtgcaggacgagctgcactcggtactgggg
ctgagcgagcggcacgtggcccaattcctgatcggtaccgcgcagcgctgcgcctcggcc
gaggagttcgtgcagcgcctgcgagacaccgataccctggacctcagtgggccggcccga
gacttcgccctgagactctggaataaggtcccacggaaggcagtggtggaaaaaccagct
cgggcagctgagcgagaggcccgagccctgctggagaagaaccgatcttacagattgctg
gaggacagcgaggagagcagtgaggagaccgtaggcaggaccaggagcagtctgcagaag
aagcggaaaaaacggaaacacttgaggaagaaacgtcaggaggaagaggaagaagaggag
gaggaagaggtttctgagaaaggaaagaggaaggcaggggggagtaaacagcagacggag
aagccagagtcggaggatgagtgggagcggacagagcgagaacgtcttcaggacctggag
gaacgcgatgcctttgccgagcgagttcggcagcgggacaaggatcggacacgcaatgtc
ctggagcggtcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggccgag
gaagaccggaaagccatggtccccgagctgaggaagaagtcccgccgagagtacctggcc
aagcgggaacgcgagaagctggaggacctggaggccgagctggcggacgaggagtttctc
tttggggacgtggagctgagccgacatgagcggcgggagctcaaatacaagcgacgtgtg
cgggatctggcccgggagtaccgggcggctggggagcaggagaagctggaggccaccaat
cgctaccacatgcctgaggagacccgaggacaggtgaagccaggggatcaccacttcatt
cccagtccccaggcagagggaagggaaggcttcaaggacttgggtggtgccttggctggc
cccttacttgtcttgccttttgctgtgggtagggtggtgactgggaaggggacgctgggc
ggagagggcaacttccatcttcacagccccctctctgcacagccagcgcgagccgtggat
ctggtggaggaggagtccggcgcccccggggaggaacagcggcgctgggaggaggcccgg
ctgggggcagcgtccttgaagtttggggcccgagatgctgcctcccaggagcccaagtat
cagctggtgctggaggaagaggagaccatcgagttcgtccgggccactcagctccagggt
gacgaggagccatcagctctacccgctccaacccaggcccagcagaaggagtccatccag
gccgtccgccgcagcctcccggtgttcccgttccgcgaggagctcgtggccgctattgct
aatcatcaggtcctcatcatcgaaggcgagacaggctcgggcaagaccacccagatccca
cagtacctctttgaggagggttacacacagaagggtatgaagattgcctgcacccagccc
cggagagtggctgccatgagcgtggctgcccgagtggcccgggagatgggggtgaagctt
gggaatgaggttggttacagtatccgctttgaggactgcacatcagagcgaactgtgctg
cggtacatgacagacgggatgcttctccgggagttcctctctgagcctgaccttgcgagt
tacagcgtggtgatggtggatgaggctcatgaacggacgctgcacacagacattctcttt
gggttaatcaaggatgtcgctcggttccgacctgagctcaaggtcctggtggcttcggcc
acactggacactgcccgcttttccacttttttcgatgacgcccccgtcttccgaatccct
ggccgcaggtttccggttgacatcttctataccaaggctccggaggcggactacctggaa
gcctgtgtggtgtctgtgctgcagatccacgtgacccagccccctggggatatcctggtg
ttcttgacaggacaggaggagatcgaggctgcctgtgagatgctccaggatcgctgtcgc
cgcctgggctccaaaatccgggagctcctggtgctgcctatttatgccaacctgccttcc
gacatgcaggcgcggatcttccagcccacgccccctggggcacggaaggtggttgtggca
acgaatatcgctgagacctctctcaccattgagggcatcatttacgtgctggatccgggg
ttctgtaagcagaagagctacaacccccgcacgggcatggaatcactcactgtcacaccc
tgtagcaaggcctcagccaatcagcgagccggtcgggcaggtcgggtggctgcagggaag
tgcttccgcctgtatactgcctgggcctatcagcacgagctggaggaaaccacggtgcct
gagatccagaggaccagccttggcaatgtcgtgttgctgctcaagagcttagggatccat
gacctaatgcactttgatttcttggaccctccgccgtatgagaccctgctgctggctttg
gagcagctgtatgcactgggagccctcaaccaccttggggagctcaccacgtctggtcga
aagatggcagagctgccggtggaccccatgctgtctaaaatgatcctggcttctgagaag
tacggctgttcagaggagatcctgacagtggccgccatgctctctgtcaacaactccatt
ttctaccgacccaaggacaaggttgtccatgccgacaatgcccgcgtcaacttcttcctc
cctggtggggatcacctggttctgctgaatgtttatacacagtgggctgagagtggttac
tcttcccagtggtgctatgagaactttgtacagtttagatcgatgcgccgagcccgggac
gtgcgggaacagctggaggggctcctggaacgcgtggaagttggcctcagttcctgccag
ggggactatatccgtgtccgcaaggccatcactgccggctacttttaccacacagcacgg
ctgactcgtagtggctaccgcacggtgaaacagcagcagacggtgttcattcatcccaat
tcttccctctttgaggaacagccacgctggctgctctaccacgaacttgtcttgaccacc
aaggagttcatgagacaggtattggagattgaaagcagttggcttctggaggtggctccc
cactattacaaggccaaggagctagaagatccccatgccaagaaaatgcccaaaaaaata
ggcaagacacgagaagagctaaggtag
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