Camelus dromedarius (Arabian camel): 105088231
Help
Entry
105088231 CDS
T04642
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105088231 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdk03400
]
105088231 (LIG3)
Enzymes [BR:
cdk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105088231 (LIG3)
DNA repair and recombination proteins [BR:
cdk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
105088231 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
105088231
NCBI-ProteinID:
XP_031324129
LinkDB
All DBs
Position
16:complement(29428901..29448552)
Genome browser
AA seq
999 aa
AA seq
DB search
MILAFKILFPPTLRALSRKELCLFREHHRPDIRQFSQWSETDLHGHRLLQRKKPVLSFQE
GSLRPRATCLVSLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRIGK
VVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQHI
ADLSSKAAGTPKKKAIVQAKLTATGQVTSPVKSASFVTNTNPRKFSGFSAKPNNSGEARS
SPAPKTSLSSSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSAGDGFHG
DVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNSDDMARDLEQGDVSETIRVFFEQS
KSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDLK
MNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASLMTPV
QPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAHF
KDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIFFN
DVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINRVIQEGLEGLVLKD
VRGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPSSQ
KWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPNWLKINKIYYPDFIVPDPKKAAV
WEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKERAAFTLV
AGDEGSSTTGGSSGENEGTSGPAVSHKAPRASPKRPSASAKKAGEKLSGSDGRGGTKLAA
KPSPVKVGEKRKAPDETPCQAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEF
DMASATHVLGSRDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgattttggcttttaagatcctcttcccaccaactctccgtgcactcagccgaaaagaa
ttgtgcctattccgagaacatcaccggcctgacataagacagttcagccagtggtcagaa
acagatcttcatggacaccgcctcctccagagaaaaaagcctgttctgtcattccaggaa
ggcagtctaagaccacgtgccacctgccttgtttccttgccagggtcgcatgtgggactc
tgcagtggcccctgtgagatggcagagcaacggttctgtgtggactatgccaaacgtggc
acagctggctgcaaaaaatgcaaggagaagattgtcaagggcgtatgccgaatcggcaaa
gtggtgcccaatcccttctcagagtcggggggcgatatgaaagagtggtaccacattaaa
tgcatgtttgagaaactggaacgggcccgggccaccacaaaaaaaattgaggacctcaca
gagctggaaggctgggaagagctggaagataatgagaaagaacagataagccagcacatt
gcagatctgtcttccaaggcagcaggcacaccaaagaagaaagccattgtccaggctaag
ttgacagccactggccaggtgacatctccagtgaagagtgcctcatttgtcaccaatacc
aatccccggaaattttctggcttttcagccaagcccaacaactctggggaagcccgctca
agccctgcccctaagacaagtctgtcctccagcaaatgtgaccccaagcacaaggattgt
ctgctacgcgagtttcggaagttgtgtgccatggtggctgaaaatcctagctacaacacg
aagacccagatcattcaggacttccttcagaaaggctcagcaggagatggtttccacggt
gacgtgtacctaacagtgaagctgttgctgccgggtgttattaagagtgtttacaacttg
aatgacaagcagattgtgaagcttttcagccgcatttttaattgcaactcagatgatatg
gcacgagacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcagagc
aagtctttccccccagctgccaagagcctccttaccatccaggaggtggacgaattcctc
ctgcgactctccaagctcaccaaggaggatgagcaacaacaggcccttcaggacatcgcc
tccaggtgtacagccaatgaccttaagtgcatcatcaggttgatcaagcatgatctgaag
atgaactcaggtgcaaaacatgtgttagatgccctcgaccctaatgcctatgaagccttc
aaagcctcgcgcaacctgcaggatgtggtggagcgggtgctccgcaacgagcaggaggtg
gagaaggagccaggccagagacgagctctgagtgtccaggcctcactgatgaccccggtg
cagcccatgctggccgaggcctgcaagtccatcgagtatgcgatgaagaagtgtccgaat
ggcatgttctctgagatcaagtatgacggggaacgagtccaggtgcacaagaacggggac
cacttcagctacttcagtcgcagcctcaagcccgtcctgccgcacaaggtggcccacttt
aaggactacatcccccaggctttccctgggggccacagcatgatcttggactctgaggtg
ctcctgatcgacaacaagacaggcaaaccactgccctttgggactctgggagtgcacaag
aaagctgccttccaggatgctaatgtctgcctgtttgtttttgattgtatcttcttcaat
gatgtcagcttgatggataggcctctgtgcgagcggcggaagtttcttcatgataacatg
gttgaaattcccaaccggatcatgttctcagaaatgaagcaagtcacgaaagcttcagac
ttggccgacatgatcaatcgggtgatccaagagggtctggaagggctggtgctgaaagac
gtgaggggcacgtatgagcctggaaagcgtcattggctgaaagtgaagaaagactacttg
aacgagggggccatggctgacacagctgacctggtggtccttggggccttctatgggcaa
gggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccgagcagccag
aagtggtgcacagtcaccaagtgtgcaggaggccacgacgacgcgacacttgcccggctg
cagaaggaactggacatggtgaagatcagcaaggatcccagcaagatacccaactggctg
aaaatcaataagatctactaccctgatttcatcgtcccagacccaaagaaagctgccgtg
tgggagatcacaggggctgaattctccaaatctgaggctcacacagccgacgggatctcc
atccgattccctcgctgcacccgaatccgtgatgataaggactggaagtctgccactaac
ctcccccaactcaaggaactgtaccagctgtccaaggagcgggcggccttcaccctagtg
gccggagatgaggggagctccaccacagggggcagcagcggagagaatgagggcacctcg
gggccagctgtctctcacaaggctccgagggcctcccccaagcggccctcggccagtgcc
aagaaggcaggagagaagctgagtggctccgacggtagaggcggcaccaagctggctgca
aagccttcccctgtgaaagtgggagagaagcggaaggcccccgatgagaccccgtgccaa
gcaaaggtgctgctggacatcttcactggggtgcggctctacctgccgccttccactcca
gacttcagtcgtctgagacgctactttgtggcattcgatggggacctggtgcaggaattt
gacatggcctcagccacacatgtgctgggtagcagggacaagaaccccgaggcccagcag
gtctccccggagtggatttgggcatgtatccggaaacggagactggtagccccctgctag
DBGET
integrated database retrieval system
