Camelus dromedarius (Arabian camel): 105088275
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Entry
105088275 CDS
T04642
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04140
Autophagy - animal
cdk04148
Efferocytosis
cdk05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105088275 (VPS41)
04148 Efferocytosis
105088275 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105088275 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cdk04131
]
105088275 (VPS41)
Membrane trafficking [BR:
cdk04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105088275 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
zf_RING_Vps8_fungal
Beta-prop_HPS5
Vps39_1
TPR_PEP5_VPS11
Beta-prop_RIG_2nd
zf_RING_Vps8
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
105088275
NCBI-ProteinID:
XP_031310508
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Position
7:5392754..5570874
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AA seq
897 aa
AA seq
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MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFLRSSCKQFVTGGKKLLLFERSWMSRWKSSVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDSVTLIIGWGTSVKI
CSVKERHASEMRDLPSRYVEIASQFETEFHVSGLAPLCDQLVVLSYVKEVSEKTEREYCA
RPRLDIIQPLPETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYVNHLVEKGEYDVAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVMVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQAYHEKQISLYAEYDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPVLPSASHCCVVPGIQVISHFNENVITCHLTGMVTPEKDIHVCL
FTVLDAAKPFSVVVFHCRHMFHKECLPVPSLNSPAQFCNICSAKHRGPGSAILEMKK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcggaggagcaggaaaccgggtctctcgaggaatctacagatgagtctgag
gaagaagagagcgaagaggagcccaaacttaagtatgaaaggctctccaatggggtgacc
gaaatccttcagaaggatgccgccagctgcatgacagtccatgacaagttcctggctctg
ggcacacattatggcaaggtttatttacttgacgtccaggggaacatcactcagaagttc
gatgtgagtcctgtgaagataaatcagattagcctggatgaaagtggagaacacatgggc
gtgtgttcagaggatggcaaggtgcaggtgtttggactgtattctggagaagaatttcac
gagacttttgactgtcccattaaaatcatcgctgtacacccgcatttcttgagatccagc
tgcaagcagtttgtgaccggagggaagaagttgctgctcttcgagcgctcttggatgagc
aggtggaagtcttccgttctgcacgaaggggaagggaacatcaggagtgtgaagtggaga
ggccatctgatcgcctgggccaataatatgggtgtgaagatttttgacatcacctccaaa
cagagaatcaccaacgtgccccgggatgatataagtctgcgccccgatatgtacccctgc
agcctctgctggaaggacagcgtgaccctgattatcggctgggggacgtctgtcaagatt
tgctcggtgaaggaacggcacgccagtgagatgagggacttgccaagtcgatacgttgaa
atagcgtctcagtttgaaactgaattccacgtcagcggactggcacctctctgcgatcag
ctcgttgtgctttcctacgtaaaggaggtttcagagaaaacggaaagagaatactgcgcc
aggcccagactggatattatccagccacttcccgagacgtgtgaagagatctcttctgat
gctctgacagtgagaggctttcaggagaatgaatgcagagattatcacttagagtactca
gaaggggagtcactcttctacatcgtgagcccaagagatgtcgtcgtagccaaggagcgg
gaccaagacgaccacatcgactggctccttgaaaagaagaaatacgaagaagctctgatg
gcagctgaaattagccagaagaacattaaaagacataagattctggacattggcttggcg
tatgtaaaccacctggtggagaaaggagagtatgacgtagcggcacgcaaatgccagaaa
attcttgggaaaaatgcagcgctctgggaatacgaagtttataaatttaaagaaattgga
cagcttaaggctatcagtccttatttgccaagaggggatccagttctgaaaccactcatc
tatgaaatgatcttacacgaatttttggaaagcgattatgagggctttgccacgttgatc
cgggaatggcccggagatctgtacaacaattcggtgatggttcaagcagtccgagatcat
ctgaagaaagacagtcagaacaggaccttacttaaaaccctggcagaactgtacacctat
gacaaaaactatggcaacgctctggaaatatacttgacgttaagacataaggatgttttc
cagttgatccacaagcataatcttttcagttctatcaaggataaaattgtcttattaatg
gattttgattctgagaaagctgttgacatgcttctggacaatgaggataaaatttcaatt
aaaaaggttgtggaagaattagaagacagaccagagttgcagcacgtgtatctgcataag
ctgttcaaaagagaccatcacaaggggcaggcctaccatgaaaagcagatcagcctctac
gcggaatacgatcgaccaaacctgcttccatttctccgagacagcatccattgccccctt
gagaaggctcttgagatctgtcaacagagaaactttgtggaagagacagtttatcttctg
agccgcatggggaatagccgaagtgccctgaagatgatcatggaggaattacacgatgtt
gacaaagccattgaatttgccaaggagcaggacgatggggagctctgggaagacctgatt
ttatattccatcgacaaaccaccgtttatcactggcttgctcaacaacattggcacgcat
gttgaccccattctcctgattcaccgcattaaggaaggaatggagattcccaatttgaga
gactccttggttaaaattctgcaagactacaacttacaaattctgcttcgtgaaggctgc
aagaagattctcgtagctgactctctctccttactcaagaagatgcaccgaactcagatg
aaaggcgtgctggtcgacgaggagaacatctgtgagtcatgcctgtcccctgttcttccg
tcagcttctcactgctgtgtagttccaggcatccaagttatctcgcatttcaatgaaaac
gtaattacttgccatctcactggaatggtgactcctgaaaaagacatacacgtttgttta
tttacagttctcgacgcggcgaagcccttcagcgtggtggtcttccactgccggcacatg
ttccacaaggagtgcctgcccgtgcccagcctgaactcgcctgcacagttctgtaacatc
tgcagcgccaagcaccggggcccaggcagcgccatcctggagatgaagaaatag
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