Camelus dromedarius (Arabian camel): 105088289
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Entry
105088289 CDS
T04642
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04151
PI3K-Akt signaling pathway
cdk04382
Cornified envelope formation
cdk04510
Focal adhesion
cdk04512
ECM-receptor interaction
cdk04820
Cytoskeleton in muscle cells
cdk04926
Relaxin signaling pathway
cdk04933
AGE-RAGE signaling pathway in diabetic complications
cdk04974
Protein digestion and absorption
cdk05146
Amoebiasis
cdk05165
Human papillomavirus infection
cdk05200
Pathways in cancer
cdk05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105088289 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105088289 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105088289 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105088289 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
105088289 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
105088289 (COL4A4)
09158 Development and regeneration
04382 Cornified envelope formation
105088289 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105088289 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
105088289 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
105088289 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
105088289 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105088289 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cdk04147
]
105088289 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
cdk00536
]
105088289 (COL4A4)
Exosome [BR:
cdk04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105088289 (COL4A4)
Glycosaminoglycan binding proteins [BR:
cdk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105088289 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105088289
NCBI-ProteinID:
XP_031308152
LinkDB
All DBs
Position
5:complement(86642265..86763854)
Genome browser
AA seq
1689 aa
AA seq
DB search
MALVRCSFRWIKPLATDSWSLILILFSVQHAYGGGKKFIGPCGGRDCSLCQCFPEKGSRG
HPGPPGPQGPIGPLGPPGPIGIPGEKGMKGDSGLPGAAGDKGDKGPTGVPGFPGLDGIPG
HPGPPGSRGKPGIDGYNGSRGDPGFPGERGAFGPEGPPGLPGKKGEKGNSVFIFGTVKGI
QGDRGDPGPPGFPGPRGARGPAGAMGYPGEPGLAGPPGPPGSPGLKGNPGVGVKGQRGDP
GEVGQQGSPGPTLLVQPPDFCLYKGEKGIKGMPGMIGAPGPPGPKGEPGFGAKGEKGIPG
FPGPRGDPGSYGSPGFPGLKGEQGLFGDPGPFGFIGPKGDPGDRGRPGPPGVLATPSLPL
KGPPGDPGRPGRYGETGMVGPPGLPGPPGRPGEVCAGMMGPPGPRGFPGPPGFPGAAGIP
GRADSAPGKPGNQGPPGFPGAPGLPGPPGPEVVYCSVGHPGPQGIKGRMGPPGRRGSKGE
KGIAGLCACQPGPMGPPGPPGLPGRQGSKGDLGLPGWPGEKGYPGPPGARGSPGPPGRPG
ARGPPGSKGEKGDMVVSRVKGRKGERGPDGPPGFPGQQGQHGRDGYAGEKGDPGPPGDHE
DAVPGDKGPPGPPGPPGKTGPRGPPGLGFPGPPGEKGLPGAPGFPGERGPDGQKGQKGDT
IPCNVTYPGRPGPPGFDGPPGPKGFPGRPGAPGLRCLDGPKGRRGKPGISGVPGPPGFRG
DVGEPGFEGEKGSSPVGPPGSPGSPGVNGQKGPPGDPAYGYPGPPGKRGLSGVPGSKGLR
GDPGRPGAAGPAGMPRFPGLKGPRGREGSAGFPGIPGLPAHSCERGAPGRPGQPGLPGPP
GSPGAPGWKGQRGDMGPPGPAGMKGFPGVPGRPGVDGPRGPPGLPGPFGDDGLPGLPGPK
GPQGLPGFLGFPGERGTPGPDGHPGRKGELGQKGWPGFPGDPGLRGVKGARGPPGDEAEI
DIISIKGKTGDPGPPGDSGFPGEQGAKGHPGMQGRRGEPGSHGPPGFHRGEPGRTGQPGL
PGLPGPPGSPGLRGIIGFPGFPGDQGEPGSPGPPGRPGVDGARGPKGYKGEPADQFGPPG
PKGEPGSPGFPGLLGPPGEQGLPGIQGPGGPPGRPGLPGPSGPAGYPGNPGVPGLRGPPG
EMGDPGPRGLTGDPGMPGLPGIKGPSGSPGLNGLHGLKGQKGTKGASGSHEMGPPGPPGI
PGPKGEPGDPGSPGISPPGLFGEKGPPGPPGPPGRAGPPGPTGAPGRAPKGDILDPGLPG
DQGPPGPDGPRGKPGPPGPPGSVDLLKGEPGDCGLPGPPGPPGPPGPPGHKGLPGCDGKD
GQKGPMGFPGPQGPHGIPGPPGEKGLPGPPGRRGTSGAPGSRGEPGPPADEDACPRIPGL
PGAPGPRGPEGAMGPPGMRGPPGPGCKGEPGPDGRRGEDGLPGFPGPPGQKGDMGEAGCP
GEPGPPGAPGDPGPKGFGLGYLSGFLLVLHSQTDGEPTCPAGMPRLWTGYSLLYLEGQEK
AHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYARRNDRSYWLASTAPLPLMPLSEEEIRP
YISRCAVCEAPAQAVAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGS
CLEDFRAAPFLECQGRQGTCHFFANKYSFWLTTVKPDLQFSSAPSPDTLKEGQAQRQKIS
RCQVCVKQS
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggcattggtaaggtgttccttcaggtggattaagcccttggccacggattcctggtcg
cttattctcattctcttttctgtacaacacgcatatgggggtggaaagaagtttattggt
ccctgtgggggaagagactgctctctttgccagtgctttcctgaaaaggggtctcggggt
cacccaggaccacctgggccacagggtcctattgggcccctggggcctccaggacccatt
ggaattccaggagagaaagggatgaaaggtgacagtggccttcctggagcagcaggtgac
aaaggtgacaagggtccaacaggtgttcctggatttccaggtttggatggaatacctgga
cacccggggcctcctggatccagaggcaaacctggcatagatggctacaatggctcaaga
ggtgatccagggtttccaggagaaagaggagcttttggcccagaaggccccccaggactt
cctggaaaaaaaggagaaaaaggaaattccgtgttcatttttggtactgtaaaaggtatt
cagggtgacagaggggacccaggacctcctggctttccaggacccaggggtgcaagaggg
ccagcgggcgccatgggatatccaggagagccagggttagcgggacctccgggccctcct
gggagtccaggtttgaagggtaatcccggcgtcggagtaaaggggcaaaggggagacccg
ggtgaagttggccagcaaggttctccgggacccaccctcttggtgcagccacctgatttt
tgtctctataaaggagaaaagggcatcaaaggaatgccaggaatgattggagctcctgga
ccaccgggacccaagggagaacctggttttggagcaaaaggagagaaaggtattcctggg
ttcccaggacctcggggtgaccctggttcctatggatctccaggttttccaggattaaag
ggagaacaaggactgtttggagatcctgggccatttggatttattggtccaaagggggat
cctggagaccgtggacgcccaggaccaccaggtgttctggcaactccatctcttccactc
aaaggccccccaggggatccggggcgccctggccgctatggagaaacggggatggtggga
ccacctggtctgcctggtcccccaggtagaccgggggaagtctgtgcaggcatgatggga
ccccctgggccacgagggtttcctggtcccccaggatttccaggggcagctgggattcct
gggagagctgattctgctccaggaaaaccagggaaccagggaccccctgggttccctgga
gcaccagggctgccgggacctccaggaccagaagttgtatattgtagtgttgggcatcct
ggaccacaaggaataaaaggcagaatgggtcctccaggaagaagaggctcaaaaggagaa
aaaggaattgcagggctctgtgcctgccagcctggtcccatgggcccaccgggcccccct
ggacttcctggaaggcaaggtagtaagggagacttggggctccctgggtggcctggagaa
aaaggttacccaggcccacctggtgccagaggatccccagggcctccaggaagacctggt
gcacgaggaccacctggaagcaaaggagagaaaggcgacatggttgtgtcaagagtcaaa
gggcgcaaaggagaaagaggtcctgatgggccccctggatttccaggccagcagggacaa
cacggtcgagatggatatgctggagaaaaaggggacccaggacccccgggggatcatgaa
gatgcagtcccgggtgataaaggacctcctggaccaccgggccccccggggaaaacagga
cccagggggcctccaggactgggattccctggaccaccaggggagaaagggctaccagga
gctccaggcttcccgggcgagaggggtcctgatggccagaagggtcagaaaggtgataca
attccttgtaatgtaacctaccctgggaggccaggccctccaggttttgatggacctcca
ggtccaaagggatttccaggtcgtccgggcgctcccgggctgaggtgtttggatgggcca
aagggtcggcgtggcaaaccaggaatctcaggagtaccgggtccacctggttttcgtggt
gacgtgggagagccaggttttgaaggagaaaaggggtcctcccctgttgggcccccaggc
tctccaggttcacctggagtgaatggtcagaaaggacccccaggagaccctgcttatggc
tacccaggacccccaggaaagaggggtctttcgggagttccagggtcaaagggactcaga
ggtgatcctggacgcccaggggctgcagggccagctggcatgcccagattcccgggtctc
aaaggtcccagaggcagagagggaagtgccgggtttccaggcatcccaggcctacccgct
cactcctgtgaaaggggcgctccagggaggccagggcaaccggggctccccgggcctcca
ggcagcccaggtgccccaggttggaaaggacaacgaggggacatgggacctcctggacct
gctggaatgaagggctttcccggagtcccaggacggccaggggtagatggaccccgagga
cctccgggactcccaggtccctttggggatgatgggctgcctggccttccaggcccaaag
ggaccccaggggctgcctggcttcctgggttttcctggagagagaggaacacctggccca
gatggacaccctggcagaaagggagaactcggacagaagggctggcctggcttcccagga
gacccaggactgagaggtgtcaaaggagcaagaggacccccaggagatgaagcagaaata
gatattatttccataaaagggaaaactggggatcctgggcctcctggagatagtggattc
ccaggagaacaaggtgctaaaggccatcctgggatgcaagggaggagaggagagccagga
agccatggaccacctggatttcacagaggggagcccgggagaactgggcagccaggcctt
cctggactcccaggccctccaggctcacctgggctgagagggatcattggttttcctgga
tttccaggtgaccagggggagccaggttctccagggccccctggacgtccaggagttgat
ggagcaagaggacctaaaggatacaaaggtgaacctgcagatcagtttggcccacctggt
ccaaagggtgagccaggtagccctggatttccaggacttctgggaccacctggagagcag
ggcttgcctggtattcaaggacctggaggaccaccgggaaggccaggactacctggcccc
tctggaccagcagggtatccaggtaatccaggtgtgcctgggctgagggggcctccggga
gaaatgggggaccccgggccgagaggcctcacgggggatccagggatgccaggtcttccg
ggaataaaaggtccttccgggtcgccgggcctgaacggcttgcatggcttaaagggtcag
aaaggaaccaaaggtgcttcaggttcacatgaaatgggcccaccaggtccaccgggaata
cctgggccaaaaggggagccgggagaccccgggagcccaggaatttctcctccaggactt
tttggagaaaaaggccccccaggccccccaggccccccagggagagctggaccgcctggt
cccacaggtgccccaggaagagctcctaagggtgacattctggacccaggtctgcctgga
gatcagggacctcctggccccgatggtccaagaggaaaacctggacctccagggccccct
gggagcgttgaccttctgaaaggggaaccaggtgactgtggcctgccggggccgccaggt
ccccccggcccgccgggccctccaggacacaaaggcctcccaggatgtgatggtaaagac
ggccagaaaggaccaatgggattcccagggccgcaggggccacatggaattcctgggccc
cctggagagaagggtttacctggacctccaggcagacgagggacctcgggtgctccaggt
tccagaggtgaacctgggcctcctgcagacgaggatgcctgcccccgaatcccggggctt
cctggggcaccaggcccaagaggaccagaaggagccatggggcccccgggaatgagaggc
cccccaggaccagggtgcaaaggggagcccgggccggatggcaggaggggcgaggacggc
ctcccagggttccctgggcctccaggacagaaaggggacatgggagaagcgggctgccca
ggagaaccaggccctcctggagccccaggggatcctgggcccaaagggtttggcctcggg
tacctcagcggcttcctcctggttctccacagtcagacggatggagaacccacctgcccc
gcgggcatgcccaggctctggacggggtatagtctgttatacctggaaggacaggagaag
gctcacaatcaagaccttggcctggcgggctcgtgccttcccgtgttcagcacgctgccc
tttgcctactgcaacatccaccaggtgtgccactatgcccggaggaacgacaggtcctac
tggctggccagcacggcgccgctgcccctgatgccgctctcggaggaggagatccggccg
tacatcagccgctgcgccgtgtgcgaggcccccgcgcaggccgtggcggtgcacagccag
gaccagagcatcccaccgtgtccacgggcctggaggagcctctggattgggtactctttc
ctgatgcacacaggagctggggaccaaggaggcgggcaggccctcatgtcacctggcagc
tgcctggaggacttcagagccgcgccgttccttgaatgccaaggccggcagggaacttgc
cacttttttgcaaataagtacagcttctggctgacgacggtgaaacctgatttgcagttt
tcctcggcaccatcaccagacaccttgaaagaaggccaggcccagcgccagaaaatcagc
aggtgccaagtctgtgtgaagcagagctag
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