Camelus dromedarius (Arabian camel): 105088386
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Entry
105088386 CDS
T04642
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105088386 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdk03041
]
105088386 (DHX38)
Enzymes [BR:
cdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105088386 (DHX38)
Spliceosome [BR:
cdk03041
]
Complex C
Other components
Step II factors
105088386 (DHX38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
T2SSE
nSTAND_NTPase5
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Sigma54_activ_2
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
105088386
NCBI-ProteinID:
XP_010977503
LinkDB
All DBs
Position
9
Genome browser
AA seq
1227 aa
AA seq
DB search
MEDSSEDASIHRLEGTDVDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSRVSSYKDWEESRDDQRDAEEEGSDQAGRSSRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDYDRKRDRDERDRSRHSS
RSERDGGSERSSRRSEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWESPSPTPSYR
DSERNHRVSSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREDG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN
NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVR
STKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcagtgaggatgcctcaatccatcgattagaaggcactgatgtggactct
caggttggcggtcttatttgtaagaccaaaagtgctgctagtgagcagcatgtcttcaag
gcccctgctccccgcccttcattgctgggactggacttgttggcttccctgaaaaggagg
gagagagaggagaaggatgatggggaggacaagaagaagtccagagtctcttcctacaag
gactgggaagagagcagggatgaccagagggatgccgaggaggagggcagtgaccaggct
ggccgaagcagccgaaaagacagacattatcgatctgctcgggtagagaccccatcccat
cctggtggtgtgagtgaagagttttgggaacgcagtcggcagagggagcgggagaggcgg
gaacatggtgtctatgcctcgtccaaagaagaaaaggatcggaagaaggagaggtctcgg
gatcgagactatgaccgcaaaagagacagagatgagcgggatagaagcaggcacagcagc
agatcggagcgggatggagggtcagagcgcagcagcagaagaagtgaacctgagagccca
cgacaccggccaaaagatgcagccaccccttcacggtctacctgggaggaggaggacagt
ggctatggctcttcaaggcgctcgcagtgggaatcgccctccccaacgccttcctatcgg
gattctgagcggaatcatcgggtgtccagtcgagatagggacaggtctgtgaggagcagg
tactcagatgacacacctctgccaaccccatcctacaaatacaatgagtgggctgatgac
agaaggcacctggggtccaccccacgtctgtccaggggccgaggaagacgtgaggatggt
gaagaaggaatttcatttgacacagaggaggaacggcagcagtgggaggatgaccagagg
caagctgaccgggactggtacatgatggatgaggggtacgatgagttccacaaccccctg
gcctactcctccgaggactacgtgaggaggcgggagcagcacctgcataaacagaagcag
aagcgcatttcggctcagcggagacagatcaatgaggataacgagcgctgggagaccaac
cgcatgctcaccagcggggtggtccatcggctggaggtggacgaggactttgaggaggat
agtgcagccaaggtgcatctcatggtgcacaacctggtccctccctttctggacgggcgc
attgtcttcaccaagcagccagagcctgtgattccagtcaaagatgccacttctgacctg
gccatcattgctcgaaaaggcagtcaaacagtgcggaagcacagggaacaaaaggaacgc
aaaaaggctcagcacaaacactgggaactggctggaaccaaattgggagatataatgggc
gtcaaaaaagaggaagagccggataaagctctgaccgaagatggtaaagtggactatagg
acagaacagaagtttgcagaccacatgaagaaaaagagtgaagccagcagtgaatttgca
aagaagaagtcgattctggagcagaggcagtacctgccgatctttgcggtgcagcaggag
ctgcttacgatcatcagagataacagcattgtgatcgtggttggggagacagggagtggt
aagaccactcagctgacccagtacttgcatgaagatggttacacggactatgggatgatt
gggtgcacccagccccgccgtgtggctgccatgtcagtagccaagagagtcagtgaagag
atggggggaaaccttggcgaggaggtgggttatgccatccgcttcgaagactgtacctca
gaaaacaccttgatcaagtacatgactgacgggatcctgctgcgagagtccctccgggaa
gcggacctggatcactacagtgccatcatcatggacgaggcccatgagcgctccctcaac
actgacgtgctctttgggctgcttcgggaggtggtggctcggcgctcagacctaaagctc
attgtcacatcggccactatggatgcagagaaatttgcttccttttttgggaatgtcccc
atcttccatatccctggtcgtaccttccctgttgacatcctcttcagcaagaccccgcag
gaggattatgtggaggccgcagtgaagcagtccctgcaggtgcacctttcaggggcccct
ggggacatccttatcttcatgcctggccaagaggacattgaggtgacctcagaccaaatc
gtggaacatctggaagaactggagaacgcgcccgccctggccgtgctgcccatctactct
cagctgccttctgacctccaggccaaaatctttcagaaggctccagatggtgttcggaag
tgtatcgttgccaccaacattgctgagacatctctgactgttgatggcatcatgtttgtt
atcgactctggttattgtaaactaaaggtcttcaaccccaggattggcatggatgctctg
cagatctaccctatcagccaggccaatgctaatcagaggtcagggcgagccggcaggacg
ggcccaggtcagtgtttcaggctctacactcagagtgcctacaagaacgagctcctgacc
accacggtgcctgagatccagcggaccaacctggccaacgtggtgctgctgctcaaatcc
ctgggggtgcaggacctgctgcagttccacttcatggacccgcccccagaggacaacatg
ctcaactccatgtatcagctctggatcctcggggccctggacaacacaggtggcctgacc
tcgactgggcgtctgatggtggaatttccactggacccagccctgtccaagatgctcatt
gtgtcctgtgacatgggctgcagctccgagatcctgctcattgtctccatgctctcggtc
ccagccatcttctaccggcccaagggccgagaggaggagagtgatcaaatccgggagaag
tttgcagtccctgagagtgaccatctgacctacctgaatgtctaccttcagtggaagaac
aataattactctaccatctggtgtaacgatcatttcatccatgccaaggccatgcggaag
gtccgggaggtgcgggctcagctcaaggacatcatggtgcagcagcggatgagcctggcc
tcgtgtggcaccgactgggacattgtcaggaagtgtatctgtgctgcctatttccaccag
gcagccaagctcaagggaatcggagagtatgtgaatatccggacaggcatgccctgccat
ctgcaccccaccagctccctctttggaatgggctacaccccagactacatagtctatcac
gagttggtcatgaccaccaaggagtacatgcagtgtgtgactgctgtggatggagagtgg
ctggcagagctgggccccatgttctacagcgtgaaacaggcaggaaagtctcggcaggag
aaccgccgacgggccaaagaggaagcatctgccatggaggaggagatggctctggccgag
gagcagctgcgggcccggcggcaggagcaggaaaagcgcagccccctgggcagtgtcagg
tccacaaagatctacactccaggtcggaaagagcaaggggaacccatgacccctcgccgc
acaccagcccgctttgggctctga
DBGET
integrated database retrieval system
