Camelus dromedarius (Arabian camel): 105088803
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Entry
105088803 CDS
T04642
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105088803 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdk03041
]
105088803 (SF3B1)
03036 Chromosome and associated proteins [BR:
cdk03036
]
105088803 (SF3B1)
Spliceosome [BR:
cdk03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105088803 (SF3B1)
Complex B
105088803 (SF3B1)
Complex C
U2 SnRNP specific factors
105088803 (SF3B1)
Chromosome and associated proteins [BR:
cdk03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105088803 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
105088803
NCBI-ProteinID:
XP_010978047
LinkDB
All DBs
Position
5:72893488..72929523
Genome browser
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagacattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgacgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagcagatttgctggatacgtgacatcgattgctgcg
actgaacttgaagatgatgacgacgactactcatcatctacaagtctgctcgggcaaaag
aagccaggataccacgcccctgtggcactgcttaatgacataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccgaagattgcagaccgggaagatgaatacaaa
aaacataggcggaccatgataatttccccggagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacagcat
ttaactaaagaagagagagaaattaggcaacagctagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcatcccagcctccttcaaaacgaaaacggcgttgg
gatcaaacagctgatcagactcctggtgccactccaaaaaagctatcaagttgggatcaa
gcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagtcac
acacctgcgggggctgctactcctggacgaggtgatacaccagggcacgcaacaccaggc
cacggaggtgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatacccctgggcatggaagtggatgggctgagactcctcgaacagatcgaggtgga
gattccattggtgaaacaccaactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggtggaagcactcctgttctgacccctggaaaaacaccaatt
ggcacaccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacaacttcaggcttggcggtgggagagagaaattgatgagagaaatcgcccactgtct
gacgaagaattagatgctatgttcccagaaggatataaggtacttcctcctccagctggt
tatgttcctattcgaactccagctcgaaaactgacagcaactccaacacctttgggtggt
atgaccggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccagcca
tcgggaaatcttccatttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaagttg
cttttaaagattaagaatggaacacctccaatgagaaaggctgcgttgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctactgatg
tctcctacacttgaggatcaagaacgtcatttacttgtgaaagttattgatagaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatcttagtggtcattgaacca
ttgttgattgatgaagattactatgccagggtggaaggtcgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataacatg
gatgagtatgtccgtaacacaacagctagagcttttgctgttgtcgcctctgccctgggg
attccttcattattgcccttcttaaaagctgtgtgcaaaagcaagaagtcctggcaagcg
agacacactggtattaagattgtacagcaaatagctattcttatgggctgtgccatcttg
ccacatctcagaagtttagttgaaatcattgagcatggtctcgtggatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccctatggt
attgaatcttttgattctgtgttaaagcctctatggaagggtatccgccaacacagagga
aagggtctggctgctttcttaaaagctattggatatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaattcttattcgagaattccagtctcct
gatgaagaaatgaagaaaattgtgctgaaggttgtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagatccttcctccttttttcaaacacttctggcaa
catagaatggctttggatagaagaaattaccgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatctccaggattgtggatgatctgaaagatgaa
gctgagcagtacagaaaaatggtgatggaaacaattgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggactcagtaatgttgaacggctttggcacagtggtcaatgct
cttggcaaacgagtcaaaccttatttgcctcagatctgtggtacagttttgtggcgttta
aataataagtcagcaaaagttcggcaacaggcagctgacttgatctctcgaactgctgtt
gttatgaagacttgtcaagaggaaaaactgatggggcacttgggtgttgttttgtatgag
tatttgggtgaagagtaccctgaagtcttgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctgctgcctagactc
acccccatcttaaagaataggcatgaaaaagtacaagagaattgtattgatcttgttgga
cgtattgctgataggggagctgaatatgtgtctgcaagagaatggatgaggatttgtttt
gagcttttagagctcttaaaagctcacaagaaagctattcgtagagccacagtcaacaca
tttggttatattgcaaaggccattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgtcgct
gaaacgtgttcacccttcacagtactgcctgccttaatgaatgaatacagagttcctgaa
ctgaatgttcaaaatggagtgttaaagtcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccactacttgaagatgctttaatggatagg
gaccttgtacacagacagacggctagtgcggtggtgcagcacatgtcgcttggggtttat
ggattcggttgtgaagattcgctgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatctccccatgtaattcaggcagttatgggggccctggagggtctgagagttgct
attggaccatgcagaatgcttcagtattgtttacagggtttgtttcatccagcccggaaa
gtcagagatgtatattggaaaatttacaattccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gattatatcttataa
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integrated database retrieval system
