Camelus dromedarius (Arabian camel): 105091385
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Entry
105091385 CDS
T04642
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105091385 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdk03019
]
105091385 (PARN)
Enzymes [BR:
cdk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
105091385 (PARN)
Messenger RNA biogenesis [BR:
cdk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105091385 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
T6PP_C
Motif
Other DBs
NCBI-GeneID:
105091385
NCBI-ProteinID:
XP_010981175
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All DBs
Position
18:24823439..24971944
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AA seq
638 aa
AA seq
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MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDCTDSKYITKSFNFYVFPKPFKRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQSNGAGALSYVSPNTSKCPVSIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKQAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTIHQF
YCPLPADLNEFKEMTACVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFSSPKV
ESAKGFPSYTTACEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYADYVGKKHEEKQIKRKWTEDGWKEVERKRLN
TQCVSYTPQNHYYYASSLTTTSTGGKRNLSPSQAEPGLEARESGEVSDSELEQTDSCAES
LSEGRKKAKKLKRMKKDLSPTGSISDSSAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcataaagtgtaccaagccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagcgatggcccttcagtc
actgcattaacaaatggttttgacactccagaagaaaggtaccagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactgcacagat
tcaaagtatataacaaagtcatttaacttctatgttttcccgaaacccttcaaaagatcc
tcaccagatgtcaaatttgtttgtcagagctcaagtattgacttcctagcaagccaaggg
tttgacttcaataaagtttttcgcaacggaattccatacttaaaccaggaagaagaaaga
cagttacgagagcagtacgacgagaaacgttcacagtccaatggggcaggcgctctgtca
tatgtttctccaaacacgtccaagtgtcccgtgtcgattcctgaggatcagaagaagttt
attgaccaagtggtagagaaaatagaagatttgttacaaagtgaagaaaacaagaacttg
gatttagagccatgtactgggttccaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcatgttgagactttagaaactgaaaagaaagagcgctatatcgtt
atcagcaaagtagatgaagaggaacgcaagagaagagagcaacagaaacaggccaaggaa
caggaagaactgaatgatgctgtgggattttctagagtcatccatgccattgctaattcg
ggaaaacttgtcattgggcacaacatgcttttggatgtcatgcacaccattcatcagttc
tactgccctctgcctgcggacttaaatgagtttaaggagatgacagcatgtgttttcccc
agactcttggatactaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattggaaaaacggttaaaagagacacctttcagctctcctaaagtt
gaaagtgcgaaaggttttccgagttataccacagcttgtgaacagctccacgaggcaggc
tatgatgcttatatcacaggactgtgtttcatctccatggcaaactacctaggttctttt
cttagtcctccaaaaattcatgtgtctgccagatcaaaactcattgaacctttttttaac
aagttattccttatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
cagcctaaacgtgatcatgtcctccatgtgacattccccaaagaatggaaaaccagcgac
ctttaccagcttttcagtgcctttggtaacattcagatatcctggattgatgatacatca
gcatttgtttccctcagccagcctgaacaagtacagattgctgtcaacaccagcaaatat
gcagaaagctatcggatccagacctatgctgactatgtggggaaaaaacacgaggagaag
cagatcaagagaaagtggacagaagatggttggaaggaggttgaaagaaagcggctgaac
acgcagtgcgtctcctacactccgcagaatcactattactatgccagcagtcttacaacg
accagcacagggggaaagaggaatctgagtcccagtcaagcagaacctggcctggaggcc
agagaatcgggggaggtttctgacagtgagcttgagcagacagattcctgtgcagaatcc
ctctcagagggacggaaaaaggccaagaaattaaaaaggatgaagaaggacctttctcca
acaggaagcatctcggacagctcggccaagctctttgaagtccctgacacgtggtaa
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