KEGG   Camelus dromedarius (Arabian camel): 105092358
Entry
105092358         CDS       T04642                                 
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk01524  Platinum drug resistance
cdk03430  Mismatch repair
cdk05200  Pathways in cancer
cdk05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105092358 (MSH6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    105092358 (MSH6)
  09162 Cancer: specific types
   05210 Colorectal cancer
    105092358 (MSH6)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    105092358 (MSH6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdk03400]
    105092358 (MSH6)
DNA repair and recombination proteins [BR:cdk03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     105092358 (MSH6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP nSTAND_NTPase5
Other DBs
NCBI-GeneID: 105092358
NCBI-ProteinID: XP_031322828
LinkDB
Position
15
AA seq 1363 aa
MSRQSTLYSFFPKSPALNNANKAPVRASSEGGAAAAATGASPSPGGDAAWSEAAPGPGPL
AGSASRSETRNLNGGLRRSAAPAAPASSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGT
FIREKGKSARIHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQR
ADEALNKDKIKRLELAVCDEPSEPEEEEEMEAGATYASDKSEEENEIESEEEVQPKVQGS
RRSSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVAP
KRKRMITGNGSLKRKSSRKEMPSATKRATGISSETKSTLSAFSAPQNSESQTHISGGCDD
SSRPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKS
QNFDLVIFYKVGKFYELYHMDALTGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGY
KVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKY
LLSLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEK
GNLSTETKMILKGSLSSSLQESLMPGSQFWDAAKTLRTLVEEGYFTDNLNEGSGVMLPQV
LKAMTSESDSIGLTPGEKSELALCALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVS
ATRPGAFFAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWL
CAPLCNPYAINDRLDAIEDLMIVPDKTSEVADLLKKLPDLERLLSKIHNVGSPLKSQNHP
DSRAIMYEETTYSKKKIIDFLSALEGFKVICKIVEIMEEVVDDFKSKILKQIITLQTKTP
EGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQ
RSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLASL
INAEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLLCLANYSRGGDGPMCRPV
ILLPEEDTPPFLDLKGSRHPCITKTFFGDDFIPNDILIGCKEEEEENGQAYCVLVTGPNM
GGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSET
ASILTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYS
QNVAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIRKGH
RKAREFEKMTQSLRLFREVCLASERSTVAAGTVRKLLTLIEDL
NT seq 4092 nt   +upstreamnt  +downstreamnt
atgtcgcgacagagcacgctgtacagcttcttccctaagtctccagcgctgaataatgcc
aacaaagccccagtcagggcctcaagtgaaggcggcgccgccgccgctgccaccggggcc
tccccttccccaggcggggatgcggcctggagtgaggccgcgccagggcccgggcccttg
gcgggctccgcgtcgcggtccgagacaaggaatctcaacggagggctgcgaaggtcggca
gcgcctgcggcccccgccagcagttcttgtgacttctcaccaggtgatttggtttgggcc
aagatggagggttacccctggtggccttgcctggtttacaaccacccttttgatggaaca
ttcatccgtgagaaaggaaagtccgcccgaattcatgtacagttttttgatgacagccca
acgaggggctgggtcagcagaaggttattaaagccatatacaggttcaaagtcaaaggaa
gcccagaaaggaggtcatttttacagtgcaaagcctgaaatactcagagcaatgcaacgt
gcagatgaagcgttgaataaagacaagattaagaggcttgaattggcagtctgtgatgag
ccctcagaaccagaggaggaagaagagatggaggcaggtgcaacttatgcatcagataag
agcgaagaagaaaatgaaattgagagtgaagaggaagtgcagcctaaggtgcaaggatcc
aggcgaagtagccgccagataaaaaaacgaagggtcatatcagactctgagagtgacatt
ggtggctctgacgtggaattcaagccggatgctaaggaggaaggaagcagtgatgaaatc
agcagtggagtgggggacagtgacagtgaaggcctggacagccctgtcaaagttgctcca
aagcggaagagaatgataactggaaatggctccctcaaaaggaaaagttcaaggaaagaa
atgccctcagccaccaaacgagcaactggtatttcctcagaaaccaagagtactttgagt
gctttctctgcccctcagaattctgaatcccaaacccacattagtggaggatgtgatgac
agtagtcgccccactgtctggtatcatgaaactttagagtggcttaaggaggaaaagagg
agagatgtgcacaggaggcgacccgatcaccctgattttgatgcatccacactctatgtg
ccggaggatttccttaattcctgtactcctgggatgaggaaatggtggcagattaagtcc
cagaactttgatcttgtcatattttataaggtggggaagttttatgagctgtaccacatg
gatgctcttactggagtcaatgaattggggctggtattcatgaaaggtaactgggcccat
tctggtttccctgaaattgcatttggccgatactcagattccctggtccagaagggctat
aaagtagcacgagtggaacagactgagaccccagaaatgatggaggcacgatgccgaaag
atggcacatatatctaagtatgatagagtggtgaggagagagatctgtagggtcattacc
aagggtacacagacttacagtgtgctagaaggtgacccctctgagaactacagtaagtat
cttcttagcctcaaagaaaaagaggaggattcttctggccacacgcgagtgtatggtgta
tgctttgttgatacttcacttggaaagttcttcataggtcagttttcagatgaccgccat
tgttccaggtttaggactctcgtggcacactatccaccagtacaagtcttgtttgagaaa
ggaaatctctcaacggaaactaagatgattctgaaaggttcgttatcttcttctcttcag
gaaagtctgatgccaggctcccagttttgggatgcagccaaaactttgagaactctcgtt
gaagaagggtattttacagacaacttaaatgagggcagtggggtcatgttaccccaggtg
cttaaagccatgacctcagagtctgattctattgggttgacaccaggagagaagagtgaa
ttggccctctgtgctctcggtggttgtgtcttctacctcaaaaaatgccttattgatcag
gagcttttatcaatggctaattttgaagaatatgtccccttggattctgacatggtcagt
gctacaagacctggtgctttctttgctaaagccaatcaacgtatggtgctagatgctgtg
acattaaacaacttggagatttttctgaacggaacaaatggttctactgaagggacccta
ctagagaagattgatacttgccatactccttttggtaagcggctcctaaaacaatggctt
tgtgccccactctgtaacccttacgctatcaatgatcgtctagatgccatagaagaccta
atgattgtgcctgacaaaacctctgaggttgcagaccttctaaagaagcttccagacctt
gagaggctactgagtaaaattcataatgttgggtctcccctgaagagccagaaccaccct
gatagcagggctataatgtatgaagaaaccacatacagtaaaaaaaagattattgatttt
ctttctgctctggaaggattcaaagtaatatgtaaaattgtggagattatggaagaagtt
gttgatgactttaagtctaaaatcctcaagcagatcatcactctgcagacaaaaactcct
gaaggccgctttcctgatttgactgtagaactgaaccgatgggatacagcctttgaccat
gaaaaggctcgaaagactggactgattactcccaaagcaggatttgacccagattatgac
caagctcttgctgacataagagaaaatgaacagagcctcttggaatacttggagaaacag
cgcagtcgaattggctgtagaaccatagtctactggggaattggtaggaatcgttaccag
ttggaaattccagagaatttcatcacccgtaatttgccggaagaatatgagttgaaatcc
acaaagaagggctgtaaacgatactggaccaaaacaattgagaagaagttggctagtctg
ataaatgctgaagaacggagagacgtatctttgaaggactgcatgcggcgactattctat
aactttgataaaaactacaaggactggcaggctgctgtagagtgcatcgcagtgttggat
gtcttactgtgcctggctaactacagtcgagggggtgatggtcctatgtgtcgtccagta
attctgctgccagaagaagatactcctccattcctggaccttaaaggatcacgtcatccc
tgcattacaaagactttttttggtgatgactttattcctaatgacattctaataggctgt
aaggaagaagaggaggaaaatggccaagcttattgtgtgcttgttactggaccaaatatg
gggggcaagtctacactcatgagacaggctggcctgttagctgtaatggcccagatgggt
tgttatgtaccagctgaagtttgtaggctcacaccaatcgatagagtgtttactagactc
ggtgcctcagacagaataatgtcaggtgaaagtacattttttgttgaattgagtgaaact
gccagtatacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaaga
ggtactgcaacatttgatgggacagccatagcgaatgcagttgttaaggaacttgctgag
aatataaagtgtcgtacactgttttctacccactaccattcattagttgaagactattct
caaaatgttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagat
cccagccaggaaactattacctttctctataaattcattaaaggagcttgtcctaaaagc
tacggctttaatgcagcaaggcttgctaaccttcctgaggaggttattcgaaagggacat
agaaaagcaagagaattcgagaagatgactcagtcactgcggttatttcgggaagtttgt
ctggctagtgaaaggtcgactgtagctgctggaactgtccgtaagttgctgactttgatt
gaggacttatag

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