Camelus dromedarius (Arabian camel): 105093324
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Entry
105093324 CDS
T04642
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X2
KO
K15172
transcription elongation factor SPT5
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105093324 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdk03021
]
105093324 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
cdk03019
]
105093324 (SUPT5H)
Transcription machinery [BR:
cdk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105093324 (SUPT5H)
RNA polymerase I system
105093324 (SUPT5H)
Messenger RNA biogenesis [BR:
cdk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
105093324 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
105093324
NCBI-ProteinID:
XP_010983475
LinkDB
All DBs
Position
9:64086449..64111423
Genome browser
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRICQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagcgaggacagcaacttctccgaggaggaggacagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaagagcggcggagtgcagcgggcagtgagaaggaggaa
gaacccgaggaagaagaggaagaggaagaagaggaggaatatgatgaggaagaagaggag
gaagatgatgaccggccacccaagaaaccccgccatggtggcttcattctggacgaggct
gatgtggatgatgagtatgaggacgaggaccagtgggaggatggcgcagaggatatccta
gagaaagaagagattgaagcctccaatatcgataatgttgtcctggatgaagaccgttct
ggggctcgccgcctacaaaacctctggagggaccagcgagaagaagaactgggcgagtat
tacatgaaaaaatatgccaagtcatctgtgggagagacagtttatggaggttctgatgag
ctctcggatgacatcacccagcagcagctgctcccaggagtcaaggatcccaatctgtgg
actgtcaaatgtaagattggggaggaacgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcggtagtggcaccagagcac
gtgaagggctacatctacgtggaggcctacaagcagacccacgtgaagcaggccatcgag
ggcgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acggatgtgcttaaagtggtgaaggaagtggccaacctgaaaccaaaatcctgggtccgc
ctcaagcggggcatctataaggacgacatcgctcaggtggattatgtggagcccagccaa
aacaccatctccctgaagatgatcccgcgcatcgactatgatcgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccgcagaggctgttt
gatgcagaaaagatcaggtccctgggcggtgatgttgcctctgatggtgacttcctcatc
ttcgagggaaaccgttacagccggaaaggctttctgttcaagagctttgccatgtctgct
gtgatcacagagggtgtgaagcctacactctctgaactggagaaatttgaggaccagcca
gagggcatcgaccttgaggtggtgactgaaagcacagggaaggagcgggaacacaacttc
cagcctggggataatgtggaggtgtgtgagggcgagctcatcaacctgcagggcaagatt
ctcagcgtggatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccggcccaggaacttcggaagtacttcaagatgggggaccacgtgaaggtg
attgctggccggtttgagggcgacacaggcctcattgtgcgggtggaggagaatttcgtc
atcctcttctctgacctcacgatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacggcatcaggtgtggatgttgggggccagcacgaatggggggagctggtg
cagctggatccccagaccgtgggtgtcatcgtgcgactagagcgggagaccttccaggtg
ctgaacatgtatgggaaggtggtgactgtcaggcaccaggctgtgacccggaagaaggac
aaccgctttgccgtggccctggactcagagcagaacaacatccatgtgaaagacattgtc
aaggtcattgacggcccccactcaggccgggagggcgagattcgccatctcttccgcagc
ttcgccttcctgcactgcaagaaactggtggagaatgggggcatgtttgtctgcaagacc
cgccacctggtgctggcagggggctcgaagccccgagatgtgaccaacttcacagtaggt
ggctttgcccctatgagtccacggatcagcagccccatgcaccccagcgctggaggtcag
cgtggtggctttggcagccctggtggtggcagtggcggtatgagcaggggccgggggcgg
agagacaacgagctcatcggccagactgtgcgcatctgccaggggccctacaaaggctac
attggcgtggtaaaagacgccacggagtccacagcccgtgtggagctgcactccacctgc
cagaccatctcagtggaccgtcagcggctcaccacggtgggctcccggcgtcctggtggc
atgacctcgacctacgggcggacacccatgtacggctcccagacgccgatgtatggctct
ggctcccgcacgcccatgtatggctctcagacacctcttcaggatggcagccgcacccca
cattatggctctcagacgcccctgcatgacggcagccgcactcctgcccagagtggggcc
tgggaccccaacaatcctaacacgccgtcacgggctgaggaagaatatgagtatgccttc
gatgacgagcctaccccatccccacaggcctatgggggcacccccaacccccaaacacct
ggctaccctgatccctcgtccccgcaggtcaacccacagtacaacccgcagacaccaggg
acgccagccatgtacaacacagaccagttctccccctatgcggccccctccccgcaaggc
tcctaccagcccagccccagcccccagagctaccaccaggtggcgccaagcccagcaggc
taccagaacacccactctccagccagctaccaccccacaccctcgcccatggcctatcag
gccagccccagcccgagccctgttggctacagtccgatgacacccggagctccctcccct
ggtggctataacccgcacacaccaggctcaggcattgagcagaactccagcgactgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacccaagtggtggggcag
accggtgtcatccgcagtgtcacgggaggcatgtgctctgtgtacctgaaggacagtgag
aaggtggtcagcatctccagtgagcacctggagcccatcacccccaccaagaacaataag
gtgaaggtgatcctgggtgaagatcgggaagccacaggtgtcctgctgagcatcgatggt
gaggacggcattgtccgcatggaccttgatgaacagctcaagatcctcaacctccgcttc
ctggggaagctcctggaggcctga
DBGET
integrated database retrieval system
