Camelus dromedarius (Arabian camel): 105093724
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Entry
105093724 CDS
T04642
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X6
KO
K12821
pre-mRNA-processing factor 40
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105093724 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cdk03041
]
105093724 (PRPF40A)
Spliceosome [BR:
cdk03041
]
Complex A
U1 snRNP components
U1 related factors
105093724 (PRPF40A)
Complex B
105093724 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
105093724
NCBI-ProteinID:
XP_010983924
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All DBs
Position
5:complement(29802727..29852355)
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AA seq
930 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQ
MMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGATSGAKSMWT
EHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKES
RWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSAAPVPTTEIPTT
MSTMAAAEAAAAVVAAAAAAAAAAAAANAGASTSASSTVSGTVPVVPEPEVTSIVATVVD
NENTVTISTEEQAQLTSTPAVQDQSVEASSNTGEETSKQETVADFTPKKEEEESQPAKKT
YTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQ
TEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEI
YEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDE
ELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQL
HSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKG
FVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKE
SAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHH
HSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYK
KSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDS
GNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagcggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagctgagcgtggaggcctcatgatggggcatcctggcatgcattatgccccaatgggc
atgcaccctatgggtcagagagcgaatatgccgcctgtacctcatggaatgatgccacaa
atgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtcttcagta
atgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgccttaccgcca
ggagtaaataatatggatgtagcagcaggtgcaacatcaggcgcaaaatcaatgtggact
gaacataaatcacctgatggacggacctactactacaatactgagactaaacagtctact
tgggagaaaccagatgatcttaaaactcctgctgagcaacttttatctaaatgcccttgg
aaggagtacaaatctgactctggaaagccttactattacaattctcaaacaaaagaatcc
cgctgggccaaacctaaagaacttgaggatcttgaaggataccagaataccattgttgct
ggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaagaaagcagtaag
caagaagagtgcaccacaacatcagcagcccccgttcctacaacagagatccccaccacg
atgagcaccatggcggccgcagaagcggcggctgccgttgttgcggcggcggcggcagcg
gcggcggctgctgctgcggccaatgctggtgcttccacctctgcttctagtactgtcagt
ggaactgttccagtcgttcctgagcctgaggttacttcgattgttgctactgttgtagat
aatgaaaacacagtaacaatttcaactgaagaacaagcacaacttactagtacccctgct
gttcaggatcagagtgttgaagcgtccagtaatactggagaagaaacgtctaagcaggaa
actgtagctgattttactccgaaaaaagaagaggaagaaagccaaccagcaaaaaaaaca
tacacttggaatacaaaggaggaggcaaagcaagcatttaaagaattattgaaagaaaag
cgggtaccatctaatgcttcatgggagcaagctatgaaaatgatcattaatgatccacga
tacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaatgcttataaagtccag
acagagaaagaagaaaaagaagaagcaagatctaaatacaaagaggctaaggaatccttt
cagcgttttcttgaaaatcatgaaaaaatgacttctacaactagatacaaaaaagcagag
caaatgtttggagagatggaagtctggaatgcaatatcagaacgtgatcgtcttgaaatc
tacgaagatgttttattctttctttcaaaaaaagaaaaggagcaagcaaagcagttgcga
aaaaggaattgggaagccttgaaaaacatacttgacaacatggctaacgtaacatactct
actacttggtctgaagcccagcagtatctgatggataatccaacatttgcagaagacgag
gaattacagaacatggataaagaagatgcattaatttgctttgaagaacacattcgggct
ttagaaaaggaagaagaagaagaaaaacagaagagtttgttgagggaaaggagacgacag
cgtaaaaatagagaatcttttcagatatttttagatgaactgcatgaacatggacaactg
cattctatgtcgtcttggatggagttgtatccaacaattagttctgacattagattcact
aatatgcttggtcagccgggatcaactgcacttgaccttttcaagttttatgttgaggat
cttaaagcacgttaccatgatgagaagaagataataaaagacattctaaaggataaagga
tttgtagttgaagtaaatactacttttgaagactttgtggcaataatcagctcaactaag
agatcaaccacgttagatgctggaaatattaagttggctttcaatagtttactagaaaag
gcagaagcccgtgaacgtgaaagagaaaaagaggaggctcggaagatgaaacgaaaagaa
tctgcatttaagagtatgttgaaacaagctactcctccaatagaattggatgctgtctgg
gaagatatccgggagagatttgtaaaagagccagcattcgaggacataactctagagtct
gaaaggaaacgaatatttaaagattttatgcatgtgcttgagcatgaatgtcaacatcat
cattcaaagaacaagaaacattctaaaaaatctaaaaagcatcacaggaaacgttcccgt
tctcgatcggggtcagattcagatgatgatgacagccactcaaagaaaaaaagacagcga
tcagagtctcgttctgcttcagaacattcttctagcgctgaatctgagagaagttataag
aagtcaaaaaaacataagaagaaaagcaagaagagaagacataaatctgactctccagag
tcagatgctgaacgagagaaggataaaaaagaaaaagaccgggaaagcgaaaaagataga
actagacaaagatcagaatcaaaacacaaatcacctaagaaaaagactggaaaggattct
ggtaattgggatacttctggcagtgaactgagtgaaggggaattggaaaagcgcagaagg
acccttttggagcaactggatgatgatcaataa
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