Camelus dromedarius (Arabian camel): 105094829
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Entry
105094829 CDS
T04642
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03440
Homologous recombination
cdk03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105094829 (PALB2)
03460 Fanconi anemia pathway
105094829 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdk03400
]
105094829 (PALB2)
DNA repair and recombination proteins [BR:
cdk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105094829 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
105094829 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
105094829
NCBI-ProteinID:
XP_010985228
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All DBs
Position
18:19259129..19281350
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AA seq
1178 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNSVKRTVEEHDSFIQ
QEVSTQLNHSEPKNEVSPCDSLQSNTNVDEETGEKTSITLDFEAESCSPGRGPVEGLCIQ
RSDDTQEHFPCRVDGPDGKKSQSKLLGRRKTQERTFISLERESFFDTDSLLLSRKRLKEQ
EEINRENPRTPVAEVRTYLSSPKSDIPDSPAPVSETNVGSVLLLPNAKLQKDADTLLSGD
NFPRVAALPLHIPSDSGSGRHLEDKPPKSNCELTTHGLKNISLASNLEAQNKKMIVFTDN
PEVNKTVSASGQLPRSPDSEADNSYSVNELTYDNLLVNENQNLKEQDHTEMSFKSPNNVL
DGRNRSLLENEVLGQSKHLSLEVISSVSTENQTQSCTMLEGLLFPAEYYVRTTRRMSTCQ
RKVALEAVIHSHLGVRKKGFKNKQSAKKLNLANEETNQCEIKMSNTYTEQPSSRSPQKLL
SLTKVSCPTGPTKTVTQTSGRKRRGKRKSVCTPVLDHHELPLPTSFTSGVNRSQEEVALH
KDQNEKAIFLEKRVKGKEGHCQKEDSLFYNNYAYLSLDDVAFSAPFLKNDMLSLKHLPPF
LKTIDFQLPDEDFGPLKLEKLKSGSEKPIEPFGSKICGEGHLKERCCIAVEELAPKPTNI
EKEDLEEELIFLPGKAHPKMPVKSQPQEKGLSSSILLFTPLNTVESDDNDRATVDVCSPA
FPILGTTPAFGSPARCEKMSAEVVGRTCSAPQLSHLKATVSLSSDHKQCSSWTSPPELDS
SLHVARRKGWPSCDQDSGPQATPLPTPSLTYKENQPSENSCQETWKHSIEQIEIADVPAC
DNLNPGTLQLVSKLKDPSGSCSVDVSAMWWDTAGFKEPRIVTACEYVVSLWKPLDAWQWE
KIYSWHFAEVPVLQIILMPDVCNLVCVALGNLEIREIRALLCSSDGKSGKQVLLSSGNIK
TVLGLTKRRLVSSSGTLCDQQVEIMTFAEDGGSKEKQFLMPPEETILTFAEVQGMQEALL
GTTVMNNMVIWNLRTGQLLKKIHVGDSYQASVCHRAYSEMGLLFVVLSHPCAKESELLGS
PVFQLIVINPKTTLSVGVMLYCLPQGQAGRFLEGDVKDHFAAAVLTSGTIAIWDLLLGHC
TALLPPVSDQNWSFVKWSGTDSHLLAGQKDGNIFVYRY
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaagcccctcagctgtgaggagaaagaaaagttgaaggaaaaa
ttagcattcttgaaaagagaatacagcaagaccctggcccgccttcagcgtgctcaaaga
gctgagaaggttaagaattctgttaagagaacagtggaagaacacgattccttcatccag
caggaagtttcaacacagctaaaccactcagaacctaaaaatgaagtatctccctgtgac
tcattacaaagcaacactaatgttgatgaagaaactggagaaaagacatctatcacactt
gactttgaggctgagtcctgcagccctggacgtggcccagtggaaggattatgcatacaa
agatcagatgatacccaagaacatttcccctgcagggttgatggccccgatggtaagaaa
agtcagagtaagctgcttggtagaagaaagacacaggagagaacatttatttcactggag
agagaatctttctttgacactgattcgctcttactctctagaaaaagactaaaggagcag
gaagaaatcaatagagaaaaccccaggacacctgtcgctgaagtaagaacttacctttca
agtcctaagtctgacattcctgattctccagcaccagtttcagaaactaatgtagggagt
gtattacttttgccaaatgccaaactgcagaaagatgctgatacactcttaagtggagat
aatttccccagggtggctgcacttcctttgcatattccatcagacagcggtagtggtcgg
caccttgaagataagcctcctaaaagtaactgtgaacttactactcacggtttaaaaaac
attagccttgcttcaaacttagaggcacaaaacaaaaaaatgattgtgtttacagataac
ccagaggtaaacaaaactgtaagtgcaagtggtcagctgcctagaagtcctgactcagag
gcagataactcatattctgtaaatgaactcacgtacgataacttattggtgaatgaaaac
caaaacttaaaagaacaagatcacacagagatgtcttttaaatctcctaataatgttctt
gatggtagaaatcgaagtcttctggaaaatgaagttctaggtcaatcaaagcatcttagc
ctagaagtaatttcttctgtttctactgaaaatcaaacacagtcttgcacgatgcttgaa
ggccttctctttccagcagaatattatgtcagaacaacacgacgcatgtccacctgccag
aggaaagtagcactggaggctgtaattcacagtcatttgggtgtcagaaaaaaaggtttt
aaaaataagcaatctgctaaaaagttaaaccttgccaatgaagaaactaaccaatgtgaa
attaagatgtccaacacatacacagaacagccaagttcaagaagtcctcagaaacttctc
tcattaactaaagtcagctgtcccactggccccactaagacggttacccagacatctggt
agaaaacgcagaggaaaaagaaagtcagtctgcacccctgtgttagatcatcatgagcta
cctttgccaacttctttcacatcaggtgttaataggtcccaggaagaagtcgccttgcac
aaagatcagaatgaaaaagcaatttttcttgagaagagagttaaagggaaggaaggtcac
tgtcaaaaagaggactcgcttttttacaataattatgcttatttatctttggatgatgtt
gctttcagtgctccatttcttaagaatgacatgctcagtttaaagcacctgccgcctttt
ctcaaaaccatagactttcaattacctgatgaagactttggacctcttaagcttgaaaaa
ctgaagtccggctccgaaaagccgattgagccttttggatcgaaaatatgtggagagggg
catcttaaagagagatgttgtattgctgtggaggaactggctcctaaaccaaccaatata
gaaaaggaagacttggaagaggaactgatttttctaccaggaaaagcacatcctaaaatg
ccagtaaaaagccagcctcaggagaagggcctttcttcatccattttacttttcactcct
ttaaatactgttgaatctgatgataatgacagagcaacggtagatgtgtgttcacctgct
ttccccatcttgggcactactccagcttttggctccccagcccgatgtgaaaagatgtct
gcagaggtggttggacgcacttgctcagcaccccagctctctcacttaaaagccacagtc
agcctctctagcgatcataagcaatgcagcagttggaccagcccaccagaattagacagc
agcctgcatgtggccagaaggaaaggatggccttcctgcgaccaggattctggtccccaa
gcaacacctctacccactccgtcactcacctacaaagaaaatcagccaagtgaaaattcg
tgtcaggaaacttggaaacattccatcgagcagattgaaatagcagacgtccctgcttgt
gataacttaaacccaggcactctacaattggtttcaaagttaaaggatccttcaggttcc
tgctctgtggacgtgagtgccatgtggtgggacacagctggtttcaaagagccacgtatc
gtaaccgcctgtgaatatgtagtttctctttggaaacctctggatgcttggcagtgggaa
aaaatttattcctggcactttgcagaggttccagtattgcagataattctaatgcctgat
gtttgtaatcttgtgtgtgtggctttgggaaatttggaaatcagagaaatcagggcatta
ctttgttcctcagatggtaaaagtggaaagcaagtactcctgagctctggaaatataaaa
actgtgcttggcctgacaaaaaggaggctagtcagtagcagtgggaccctttgtgatcag
caagtagaaatcatgacgtttgcagaagatggaggaagcaaagaaaaacagtttttgatg
ccccctgaagagactatactgacttttgctgaggttcaagggatgcaggaagctctgctg
ggtaccactgtaatgaacaacatggttatttggaatttaagaactggccagctcctaaag
aagatacacgttggtgactcctaccaagcttcagtctgtcacagagcctattctgaaatg
gggctcctgtttgttgttctgagtcatccttgtgccaaagagagcgagctgttgggcagc
cccgtgtttcagctgattgtgattaacccaaagacgaccctgagtgtgggcgtgatgctc
tactgtcttcctcaagggcaggctggaaggttcctggaaggtgacgtgaaagatcatttt
gctgcagcagtactgacttctggaacaattgccatttgggacttacttctgggtcattgc
actgctctccttccccctgtctctgaccaaaattggtcctttgttaaatggtcaggtaca
gattctcatttgctggctggacaaaaagatggaaatatatttgtgtaccgctactaa
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