Camelus dromedarius (Arabian camel): 105094907
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Entry
105094907 CDS
T04642
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105094907 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdk03019
]
105094907 (PATL1)
Messenger RNA biogenesis [BR:
cdk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105094907 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
105094907 (PATL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
105094907
NCBI-ProteinID:
XP_031315394
LinkDB
All DBs
Position
10:5651994..5678774
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AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVSEQTGNGGRDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPAQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPASVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPPQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGDGPKKERTKLITPQVARLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALTDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM
NLPQSAAAPAPSNPHLTAVLQNKFGLSLLLVVLSRGEDLQSSDPATESMQSNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctgggagaggaagatgaagagattgatcaattcaacgacgatacatttgggtcaggt
gcagttgatgatgactggcaggaagcccatgagcgcctggctgaattggaagagaagctg
cctgtggccgttagtgaacaaacaggcaatggaggaagggatgagatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgatcgaaaatgaactagaa
gatccagctatcatgagggcagtgcagaccaggccagtgttgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttttgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcctgcacag
ggcccagaagatgatcgggacctttctgagcgtgcgttaccaaggcggtccacgtcgcct
gtcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccagcagattctgtgtccgaaacctgtccatgttcggcccccgatg
ccaccgcggtatcctgctccctatggtgagaggatgtctccgaaccagctctgcagtgtc
ccgaattcttccctactgggtcaccctttccccgctagtgttcctcctgttctcagtccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacgaatgtctcccagc
cagtttgcacgggtccctggatttgttggcagtccactggctgccatgaatcccaagttg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttcttcagt
gctccaccccctgctacaccgcctcctccgcagcacccccctggcccaggacctcacctg
caaaacctaagatctcaggccccaatgtttagaccagacacaactcaccttcatccacag
caccgtcgactcttacatcagagacagcaacagaacagaaatcagcatcggaatctcaat
ggtgcaggagacagaggaagtcaccggagcagccatcaggatcatctccggaaggatcca
tatgccaatctcatgttgcagcgagagaaggattgggtctctaaaatccagatgatgcaa
ctgcaaagcactgatccctacctggatgacttttattaccagaattactttgaaaaactg
gagaaactgtcagctgctgaagaagtgcaaggcgatggccctaaaaaggagcgcaccaag
ctcattacccctcaggtggccagactggagcacgcctataagccagtgcagtttgagggc
tctttgggaaagcttactgtctctagtgtgaacaacccccgaaaaatgattgatgctgtt
gtgacatctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaaaagacga
aaaacccttgtcataattgagaaaacctatagtctcctcctcgacgtggaggattatgaa
aggcgttacctcctaagtctggaagaagagcgacctgctctgacggatgaaagaaagcac
aaaatttgtagcatgtatgacaacttaagagggaaattgcctggacaagagaggccgagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagaggatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaacctc
cctttccttatcaagaaagatgcacaagacgaggtgctgccatgcttattgagtcccttc
tccctccttctctatcatcttccgtcagtgaccgtcaccagccttctgcaacagctaatg
aacctacctcagagtgcagctgcaccagcgccctccaatcctcacctcactgctgtgctc
cagaacaagttcggcctgtcactgctccttgtcgtcctgagccgcggggaagacctgcag
agttcagaccccgcaacagaatcaatgcagagcaaccagtggacggaggtgatgttcatg
gcaacccgagaacttctgcggattccccaggcagccctagccaagccaatctctatcccc
acaaacctagtgtccctcttctctcgttatgttgaccgacagaaactgaacttgctggag
acaaaactgcagctagttcaggggatacgataa
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