KEGG   Camelus dromedarius (Arabian camel): 105097104
Entry
105097104         CDS       T04642                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105097104 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cdk03041]
    105097104 (CDC40)
Spliceosome [BR:cdk03041]
 Complex C
  Other components
   Step II factors
    105097104 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NWD2_C WD_LRWD1 WDR54 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 105097104
NCBI-ProteinID: XP_010987893
LinkDB
Position
8:36430830..36475254
AA seq 579 aa
MSAAIAALAASYGSGSGSESDSDSEGGRCSLPAADSLMHLTKSPSAKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNVWDWKTT
KLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtcggctgcaattgcagctctggctgcttcctatggttcgggttcagggtccgaatcg
gactcggacagtgagggcggacgatgttcgctgccagccgcggactccctcatgcacttg
accaaatcgccttcagcaaagccctctctagcagtggcggtggactccgctccggaggtg
gcagttaaggaagatttggaaactggagttcaccttgaccctgctgtcaaagaggttcag
tataatcctacctacgagaccatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcccctagaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatatggttatgcattggac
ccttcattagataatcatcaagtatctgctaagtatattggttctgtagaagaagctgaa
aaaaatcaaggtttaactgtatttgaaactggtcagaagaaaatagaaaagaggaaaaaa
ttcaaagaaaatgatgcatctaatattgatggtttcttgggaccgtgggcaaaatatgtg
gatgaaaaagatgtagccaaaccttcagaagaagaacaaaaagagttggatgaaatcaca
gcaaagaggcagaaaaaaggcaaacaggaagaagagaaacctggggaggaaaagacgatc
ttacatgttaaagaaatgtatgactaccaaggcaggtcctatcttcacatacctcaggat
gttggtgttaatctgcggtcaactgtgccacctgagaagtgttaccttcccaaaaaacaa
atacatgtgtggtctggacacacaaagggtgtcagtgcagtcagattattccctctctct
ggccatttgttgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgga
gacaggcgctgtctgcgaacatttattggtcacagtaaagctgttagggacatctgcttt
aatactgcagggacacagttcctcagcgcagcttatgacaggtatcttaagctctgggac
actgagacaggacagtgtatatcaaggtttacaaacagaaaagtaccctattgtgtgaaa
tttaatcctgatgaagataagcaaaatctctttgtggctgggatgtctgataaaaagatt
gtgcaatgggacattcgaagtggagaaattgtgcaggagtatgatcggcatttgggagct
gtcaacaccattgtttttgtcgatgagaataggagatttgtgagcacatctgatgacaaa
agcctaagagtttgggaatgggatatacctgtggatttcaagtatatagctgaacccagt
atgcactcaatgcctgcagtgactttgtctccaaatgggaaatggctggcatgccagtcg
atggacaaccaaatcttaatttttggagcacagaacagatttagattaaataagaaaaaa
atttttaagggccatatggtagctggctatgcttgtcaggtagacttttcaccagacatg
agctatgtgatttcaggagatggaaatggaaaattaaacgtttgggactggaagaccaca
aaactctacagtagatttaaagctcatgataaagtgtgtataggcgcagtgtggcatcct
catgaaacatctaaagtcataacttgtggttgggatggtctcattaaattgtgggattaa

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